Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1389 ATGGGCTTTTTCCGGCGACTCTTCGGCGCCAAGAAATCCGATCATTCCTCCGCTTCCTCCGGCAAGGACAAGAAGAAATGGAGCTTCGGGAAAGCCAACAAGGACAAGTCTCACGGTTCTAAAACTAAAGGATCTGATCTCAACCACTTTGATTCCTCCACTACATTCTCCGACTCTTTAGATGCAAATAAGCATGCTATCGCTGTCGCGGCCGCCACCGCCGCCGTGGCTGAGGCTGCACTAGCCGCTGCTCATGCGGCCGCAGAGGTAGTCCGACTAACAAGTGGCGGCACCGTCACTCGACCGGTGACTACTACGACACAGGCTAGTAGCACTAGCCATCGCCGGTGGGTGGAGGAAGCGGCCGCCGTTAAAATCCAGTCTTCTTTCCGTGCTTATCTGGCAAGGAGAGCACTGCGAGCACTCAAAGCATTGGTGAAGTTACAAGCACTGGTGAGAGGCCACATAGTAAGAAAGCAAACTGCAGACATGCTCAGGCGCATGCAAACATTAGTCAGACTGCAGGCTCAGGCACGTGCAAGTCGTGTGTGCATGTCAGATCATCTGCATTCTGGCAAGCCTTCACTGTTTTATCATCCTGTACCTGACGATCATGAGCACCCACTCCGTGCCTATAGTACAAAATTTGATGCATCTTCTATCCTAAAGAGATGTAGCTCCAATGCAAATTTCAGGGAGATTGGTCCACAAAGAGCGCAGTTTGGATCACATTGGTTAGATCGTTGGATGGAAGAAAGTGTTTGGAGCCATTCCAGAGACGCTTCATCACTGAGAAATGTGTGCACGGATGATGAGAAGAGTGACAAGATCCTTGAAGTGGATACATGGAAGCCACACTTGAGATCTCATTGTAGCAGCAGCTCCTTCCACGCGTCTCAATGCTACTCAGCTTCGGACTATGTCAACAGCGAGACGGTATACGACTCTCCTTCGAAAAGGTCAGCAAAAGCTCTAAACCAAAGCCTCTCATCACTGAGCTCCTTGAAGATTCAGAAAGGAAAAGAAGTAGCATCAGCTCCAAGAACTGTTGAGAATAGCCCACAAGCACTTTCAGCTTTATCATCTAGACCTGGAAGTGGAGGTAGGAGAGGTGGTCCTTTCACTCCGACAAGGAGTGAGTGTTCTTGGGGTATCTTTGGCTATCCAAGTTACATGGCCAACACTGAATCATCAAAGGCTAAGGTTAGATCTCAGAGTGCTCCTAAGCAAAGGTTCGAGTTTGAGAGATATAGTTCAAGTGCGAGAAGCATTCAAGGGCTCTGGGATTCAGATAGGGAGGGAGATTTCAGGAACAGAGCCTATCCTGCTTCAACTCGCTTGAACAGAATTGGGAGTGCCAATTTAAGGTGA 1371 0.4916 MGFFRRLFGAKKSDHSSASSGKDKKKWSFGKANKDKSHGSKTKGSDLNHFDSSTTFSDSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGGTVTRPVTTTTQASSTSHRRWVEEAAAVKIQSSFRAYLARRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQAQARASRVCMSDHLHSGKPSLFYHPVPDDHEHPLRAYSTKFDASSILKRCSSNANFREIGPQRAQFGSHWLDRWMEESVWSHSRDASSLRNVCTDDEKSDKILEVDTWKPHLRSHCSSSSFHASQCYSASDYVNSETVYDSPSKRSAKALNQSLSSLSSLKIQKGKEVASAPRTVENSPQALSALSSRPGSGGRRGGPFTPTRSECSWGIFGYPSYMANTESSKAKVRSQSAPKQRFEFERYSSSARSIQGLWDSDREGDFRNRAYPASTRLNRIGSANLR 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1389 456 MobiDBLite consensus disorder prediction 340 378 - -
Prci1g1389 456 Gene3D - 119 172 - -
Prci1g1389 456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 164 IPR027417 -
Prci1g1389 456 MobiDBLite consensus disorder prediction 1 48 - -
Prci1g1389 456 MobiDBLite consensus disorder prediction 348 362 - -
Prci1g1389 456 PANTHER IQ-DOMAIN 5-RELATED 3 421 - -
Prci1g1389 456 Pfam Protein of unknown function (DUF4005) 367 412 IPR025064 -
Prci1g1389 456 ProSiteProfiles IQ motif profile. 119 147 IPR000048 GO:0005515
Prci1g1389 456 MobiDBLite consensus disorder prediction 8 45 - -
Prci1g1389 456 SMART iq_5 118 140 IPR000048 GO:0005515
Prci1g1389 456 SMART iq_5 141 162 IPR000048 GO:0005515
Prci1g1389 456 Pfam IQ calmodulin-binding motif 143 160 IPR000048 GO:0005515
Prci1g1389 456 Pfam IQ calmodulin-binding motif 121 140 IPR000048 GO:0005515
Prci1g1389 456 ProSiteProfiles IQ motif profile. 143 170 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1389 Prci-Chr1 30558482 30563059 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1389 1 428 IQD Protein Family AT5G62070 47.045 6.77e-67 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1389 - - vum:124834771 414.846