Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1367 ATGATTCAAACCACGCGATTCCATTTCACCTTCCTCACATGGGTTCAACTGCTTTTCCGGATATTCGTGCTACGCGCCGCCGCGCAATCCGCCGTGCAGCCAGTGCCGTCCTTTGCATCGCACCAGAACTGGGACCCTTCAATTGCGGCCATGGTTGGGGCTCTGTTCTGCGCGTTCCTATTCATCGGCTTCTTCTCCGTCTACCTCCGCCATTGCTCCGACGAGGAAGCCGCCACCGGCCAAGCTGGAGAATGCTCGTGCTCGTGCTCGGAGGGCATTGACCGGAAAGTCCTGGACACGTTCCCCATCCTTGTCTATTCCACCATCAAGGATCTCAAAATAGGTAAAGGAGCACTCGAATGTGCAGTGTGCTTGAACGAGTTCAAAGATTACGAGACTCTCCGATTGCTTCCGAAATGCAACCACGTGTTCCATCCTTCTTGCATCGAAGCTTGGCTATCTTCCCACGTGACTTGCCCCGTTTGCCGGGAAAAGCTGAACCCAGATTACGACCAAGTGGCCATAACGGTTCCCCCACAATTGAACGTTATAGGGAGTAGTGATAATAATCGCAGGGATGAACATGAGGAAACTGAGGAAAACGAGAGTCGGAGCGGTTCGAGAGGCGGTGAGGTTGAGGAGGACGGTGCGGTGGCTGTCGGAGGAGATCAGTTGAAGTCGGGGAGGTTGAAGGAGTTGAGGAGGTCGAATTCGACAGGTCATTGTGAGGTGGAGAGGTATACGTTGAAGCTGCCGGAGGATGTTCGGAAGTATATTCTGGTAAACCATCATGGGGCCATGCGGCGGTCGGCGAGTTACAACGTCGTAATGTCCATCGGAGGTAGTCCGAGGAAAGGGTTGTGTCGGAACGAGAAGCAGGTTATCAAGATGCACAAGGAAGATATTGTCCCTACTCCACCACTAGTTCCTTGA 933 0.5327 MIQTTRFHFTFLTWVQLLFRIFVLRAAAQSAVQPVPSFASHQNWDPSIAAMVGALFCAFLFIGFFSVYLRHCSDEEAATGQAGECSCSCSEGIDRKVLDTFPILVYSTIKDLKIGKGALECAVCLNEFKDYETLRLLPKCNHVFHPSCIEAWLSSHVTCPVCREKLNPDYDQVAITVPPQLNVIGSSDNNRRDEHEETEENESRSGSRGGEVEEDGAVAVGGDQLKSGRLKELRRSNSTGHCEVERYTLKLPEDVRKYILVNHHGAMRRSASYNVVMSIGGSPRKGLCRNEKQVIKMHKEDIVPTPPLVP 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1367 310 SMART ring_2 121 162 IPR001841 -
Prci1g1367 310 CDD RING-H2_EL5-like 120 163 - -
Prci1g1367 310 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
Prci1g1367 310 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 171 IPR013083 -
Prci1g1367 310 FunFam E3 ubiquitin-protein ligase ATL6 82 169 - -
Prci1g1367 310 PANTHER RING FINGER DOMAIN-CONTAINING 37 166 - -
Prci1g1367 310 MobiDBLite consensus disorder prediction 181 215 - -
Prci1g1367 310 Pfam Ring finger domain 120 163 IPR001841 -
Prci1g1367 310 SUPERFAMILY RING/U-box 120 171 - -
Prci1g1367 310 MobiDBLite consensus disorder prediction 188 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1367 Prci-Chr1 30025130 30026660 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1367 8 286 Rapid Response to Elicitors AT3G05200 37.540 1.94e-53 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1367 K10664 - gmx:100782532 234.572