Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1365 ATGACCAAGAGAATTACACTACTCCCACACGTCGTCGTCTTCTTCCTTCTATCATCGGCCGTCCATGCCCACTCGGATAAACGGGTCCCATTATTGGATCCCACCGTCGTAGCCATCGTCTTCGTCTTCTTGTTCGTCGGCTGCTTCTCCATCTACCTTCGCCACTGCTCCGGTATGTACCGTCGTAGCCGGAGCGGCACTACCGGCAATTTTTACTCAAGTAGGCTTCAAGGTATCCATCCAAATGTACTCGCCACCTTCCCCATCCTTCCATGTTCCGCCGTGAAACAACTTAAACTTGGTAGTGCCTCGCCGGAGTGTGCCGTGTGCTTGAGCGAGTTCAATCACCAAGATAAGCTCCGATTGCTTCCGACATGTAACCACGTGTTTCACTCTGAATGCATCGACGCCTGGTTGGCCTCCCACGTGACTTGCCCAGTTTGTCGCATGAAGCTGAAGCCGGCGGCGGCGGAAGAGAATCACCGACGTGAAAACGACGTCGTGATAGAAATTCCCTGTGAGGTCACAAATGCACACCACGAGTTCGATTATAAAGGTTCTACGAGTAGATCTACGGAGCTTAATTCAGGAGACAGGAGAAGAAGTTTGGTGAGGTGTCATTCAACGGGTCACTCTGTGGGATGGGGTGAGTTCGGAAGGAAGGACTTGGAGAGGCAGAATCTCAGGTTCGTGAATCACAGAGGAACGCGACGGTCGGCGAGCTACGATGTGTTTCGTGGACGGCCGGGTGAAGAAAACAGTAACTAG 768 0.5234 MTKRITLLPHVVVFFLLSSAVHAHSDKRVPLLDPTVVAIVFVFLFVGCFSIYLRHCSGMYRRSRSGTTGNFYSSRLQGIHPNVLATFPILPCSAVKQLKLGSASPECAVCLSEFNHQDKLRLLPTCNHVFHSECIDAWLASHVTCPVCRMKLKPAAAEENHRRENDVVIEIPCEVTNAHHEFDYKGSTSRSTELNSGDRRRSLVRCHSTGHSVGWGEFGRKDLERQNLRFVNHRGTRRSASYDVFRGRPGEENSN 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1365 255 FunFam E3 ubiquitin-protein ligase ATL6 68 155 - -
Prci1g1365 255 CDD RING-H2_EL5-like 106 149 - -
Prci1g1365 255 SUPERFAMILY RING/U-box 100 155 - -
Prci1g1365 255 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 85 157 IPR013083 -
Prci1g1365 255 SMART ring_2 107 148 IPR001841 -
Prci1g1365 255 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Prci1g1365 255 Pfam Ring finger domain 106 149 IPR001841 -
Prci1g1365 255 PANTHER RING FINGER DOMAIN-CONTAINING 28 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1365 Prci-Chr1 29923043 29923810 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1365 7 213 Rapid Response to Elicitors AT3G05200 35.714 1.41e-34 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1365 K10664 - pcin:129287042 531.176