Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1364 ATGGCTTCTCCTAAATATTGGGACCCATCGTTCACTTCGGTGGCTCTGGTCTTCGTTTGCGCATTCTTGTTCGTTGGTTGCTTCGCCCTCTACCGCTGCTCGGACATGGACATTGCCTCTGGCGACACGACCGGCGCCACCACCAATTGTTCTTCAAGTGGCCCTCAAGGTATCGACCCCAATTTACTCGACACCTTCCCCATCGTCGTGTATTCCGCCGCCGTCAGCCACCTCAAATTTGGGAAAGCCGCCGTGCCGGAGTGTGCTGTGTGCTTGAGCGAATTCGATCACCAAGATACGCTCCGATTGCTACCCAATTGTAATCACGTGTTTCACCTTGAATGCATCGACGCCTGGTTGGCCTCTCACGTGACTTGCCCCGTCTGTCGCTCGAGGCTGAAACCGGCGAAGGAGCACCGCAGAGTTGGAAACGAAGTGGTGATAGTGATTCCGAATGATGCTATAGACGCAGATCAGGTGTTAGATGAAAGTTCTGCGAGTAGAACTGAGCTTAATTCAGGATATGGAAGAAGTTTGGGAAGGTGTCATTCGACGGGTCACTCTTTGGGTTTGGGTGAAATCGGAGGGAAGGACACGGAGAGGTGCACTGTGACTTCGCCGGAGGATGTAAGGAAACAGATTCCGGTGAATCTTGGAAAAATGCGCCGGTCGGCGAGCTACGATGTGTTCTGTAATCGGCCGGGTGAAGAGAGCAGTAGAAAGCATTCTTTTCTTTGA 738 0.5244 MASPKYWDPSFTSVALVFVCAFLFVGCFALYRCSDMDIASGDTTGATTNCSSSGPQGIDPNLLDTFPIVVYSAAVSHLKFGKAAVPECAVCLSEFDHQDTLRLLPNCNHVFHLECIDAWLASHVTCPVCRSRLKPAKEHRRVGNEVVIVIPNDAIDADQVLDESSASRTELNSGYGRSLGRCHSTGHSLGLGEIGGKDTERCTVTSPEDVRKQIPVNLGKMRRSASYDVFCNRPGEESSRKHSFL 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1364 245 ProSiteProfiles Zinc finger RING-type profile. 88 130 IPR001841 -
Prci1g1364 245 SMART ring_2 88 129 IPR001841 -
Prci1g1364 245 Pfam Ring finger domain 87 130 IPR001841 -
Prci1g1364 245 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 136 IPR013083 -
Prci1g1364 245 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Prci1g1364 245 CDD RING-H2_EL5-like 87 130 - -
Prci1g1364 245 FunFam E3 ubiquitin-protein ligase ATL6 46 136 - -
Prci1g1364 245 SUPERFAMILY RING/U-box 87 151 - -
Prci1g1364 245 PANTHER RING FINGER DOMAIN-CONTAINING 11 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1364 Prci-Chr1 29901887 29902829 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1364 9 241 Rapid Response to Elicitors AT3G05200 35.521 4.58e-35 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1364 K10664 - pcin:129287042 219.935