Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1353 ATGAGTTTCCAGAGCTGTCCAAATGTGATAAGGAGGATCACTCTCTCGCACATCCTCGTCTTCTTCCTTCTATCGTCGGCCGTCCATGCCCAGTCAAGGTCGCCACCGGAGGCTTCTCCTGGTGCTTCACTTCGCAACAGGAACGCCTTATTCGCCCCCGTGGTTGTCGCCCTCGGTTGCGCCCTCCTCTTCATCGCCTGCTTCGTCATCTACATCCGCCAATGCTCCGACTTGGAACTTCCTGCCGGAGGCCCGACAGACGCTGCCACCGTCAATTGCTCTTCAAGTGCTCCTCACGGTATCGACCCGAAATTACTCGAAACCTTCCCCATCCTCGTGTATTCCGCCGTCAAACACCTCGACTTTGGGAAAGCCACCGCTCCGGAGTGTGCGGTGTGCTTGAACGAGTTCAACCACCACGATACGCTCCGATTGCTTCCGAAATGTCACCACGTGTTTCATCCTGGATGCATCGATGCCTGGTTAGCCTCCCACGTTACTTGCCCTGTTTGTCGCTCGAGGCTGAAGCCGGCGGAGGACCACCACCGAGGTGAAGGCGATGTGGTGATAGTTATTCCAAATGAGGTTACAAATGCACAACAGGCGTTCGATGAAAGTTCTGTGACAAGAACGGAGCTTAATTCAGGCAACAGAAGTTTAGGGATGTGTCATTCAACTGGTCACTCTTCGGGTTTGGGTGAAAGTGAAATCGAAGAGGAGAGACACAGAGAGGTACAGTCTGAGGATGTCGGAGGATGTGATTAA 765 0.5359 MSFQSCPNVIRRITLSHILVFFLLSSAVHAQSRSPPEASPGASLRNRNALFAPVVVALGCALLFIACFVIYIRQCSDLELPAGGPTDAATVNCSSSAPHGIDPKLLETFPILVYSAVKHLDFGKATAPECAVCLNEFNHHDTLRLLPKCHHVFHPGCIDAWLASHVTCPVCRSRLKPAEDHHRGEGDVVIVIPNEVTNAQQAFDESSVTRTELNSGNRSLGMCHSTGHSSGLGESEIEEERHREVQSEDVGGCD 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1353 254 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 181 IPR013083 -
Prci1g1353 254 ProSiteProfiles Zinc finger RING-type profile. 130 172 IPR001841 -
Prci1g1353 254 SUPERFAMILY RING/U-box 129 178 - -
Prci1g1353 254 MobiDBLite consensus disorder prediction 204 232 - -
Prci1g1353 254 FunFam E3 ubiquitin-protein ligase ATL6 89 178 - -
Prci1g1353 254 PANTHER RING FINGER DOMAIN-CONTAINING 34 175 - -
Prci1g1353 254 MobiDBLite consensus disorder prediction 204 254 - -
Prci1g1353 254 Pfam Ring finger domain 129 172 IPR001841 -
Prci1g1353 254 MobiDBLite consensus disorder prediction 233 254 - -
Prci1g1353 254 SMART ring_2 130 171 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1353 Prci-Chr1 29817242 29818006 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1353 18 185 Rapid Response to Elicitors AT3G05200 49.143 8.70e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1353 K10664 - pcin:129287042 210.69