Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1351 ATGATTAAGCGAATTACAGTCTCCTTCGTCATCATCTTCTTCCTTCTATCGTCGGCCGTCGGTGCCCAGTCAAGTTCCGGCTCGGTGAATTCTCCAAATGCTCCAATTCGCACTTGGGACGTATCATTCGCTCCCGTGGCTGTGGCCCTCGTTTGCGCCTTCGTGTTCATCGGTTGCTATGCCATCTACCTCCACCGCTGCGCCGACTTGGAACTGCCTGACGGAGACCCGACTGGCGCCGCCGCTAATTGCTGTTCAAGTGGTCATCAAGGTATCGACCCAAAATTACTCGATACCTTCCCCATCCTCGTTTATTCCTCCGTCAAACACCTCAAATTTGGGAAAGCTACGTTGGATCAGTGTGCCGTGTGCTTGAGCGAGTTTGAGTCCCACGATACGCTGCGATTGCTTCCCAATTGTGCCCATGTGTTTCACCCTGAATGCATCGACGCTTGGTTGGCCTCCCACGTGACTTGCCCCGTTTGTCGGTCGAGGGTGAAACCGGCGGAGGAGCACCGCCGAGGTGAACACGAAGTAGTGATAGTGATTCCGAATGAGGTTATTAATGCACACCAGGTGTTCGATGAAAGTTCTGTGAGCAGAACAGAGCTTAATTCAGGAGAAGGAAGAAGTTTGGGAAGGTGTCATTCAACGGGTCACTGTTTGGGTTTGGGTGAAATCGGAGGGAACGATGCGGCGAGGTACAGTCCGACGACTTTGCCGGAGGATGTAAGGAAACATATTCTGGTGAGTCATGGAGGAATGCGGCGGTCGGCGAGCTACGATGTGCTCTGTAGACGGCTGAGTGATGAAGAGAGCCTTTGA 825 0.5285 MIKRITVSFVIIFFLLSSAVGAQSSSGSVNSPNAPIRTWDVSFAPVAVALVCAFVFIGCYAIYLHRCADLELPDGDPTGAAANCCSSGHQGIDPKLLDTFPILVYSSVKHLKFGKATLDQCAVCLSEFESHDTLRLLPNCAHVFHPECIDAWLASHVTCPVCRSRVKPAEEHRRGEHEVVIVIPNEVINAHQVFDESSVSRTELNSGEGRSLGRCHSTGHCLGLGEIGGNDAARYSPTTLPEDVRKHILVSHGGMRRSASYDVLCRRLSDEESL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1351 274 CDD RING-H2_EL5-like 120 163 - -
Prci1g1351 274 SUPERFAMILY RING/U-box 120 172 - -
Prci1g1351 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 172 IPR013083 -
Prci1g1351 274 PANTHER RING FINGER DOMAIN-CONTAINING 33 170 - -
Prci1g1351 274 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
Prci1g1351 274 SMART ring_2 121 162 IPR001841 -
Prci1g1351 274 Pfam Ring finger domain 119 163 IPR001841 -
Prci1g1351 274 FunFam E3 ubiquitin-protein ligase ATL6 80 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1351 Prci-Chr1 29741706 29742883 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1351 10 266 Rapid Response to Elicitors AT3G05200 34.892 1.02e-40 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1351 K10664 - pcin:129287042 222.246