Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1350 ATGATCAGTAGAATCACACACATACACGTCCTTGTCTTCTTCCTTCTCTTGTCGGCCGTCGTCCATGCCCAGTCTAGTTCGCCGCCGGTGGCTTCTCCTAAAGTTACTCCCCACAACTTGGTCTACCCATCCTTCGATCCTGTGGTTGTGGCCTTCATTTGCTTCTTCTTGTTCATCAGCTGCTGCTCAATATACCTCCGCCACTGCTCCACCATAAACCTGGCCGCCGGAAACCTAACTCCCACCACCACGAATTGCTCCTCAAATGATCCTCAAGGTGTCGATCCAAAATTACTGGACACCTTCCCGATCTTCCTATATTCCGCTGTGAAACACCTCAAATTTGGGAAAGCCCCACTCGAGTGTGCCGTGTGCTTGAGCGAGTTTAACCACCAAGATACGCTCCGACTGCTTCCGAAATGTAACCACGTGTTTCATCCTCAATGTATCGACGCCTGGTTAGCCTCTCATGTGACTTGCCCTGTTTGTCGATCAAGGCTGATGCCGGCGGAGGAGGAGCACCACGGTGGTGAAAACGAAGTCGTGATAGTAATTCCGAATGATGTAAATGCACATCAGGTGTTCGATGAATGTTCTGTGAGCAGAACGGAGCTTAATTCAGGCAATGGAAAATGTTTGGGGAGGTGTCATTCAACGGGTCACTCTTTGGGATTGCGTGAAATCGGAGGGAAGGACACAAAGAGGTACACTATTTTGATGTCGGAGAATCACGGAGGAATGCGACGGTCGGCGAGCTACGAAGTGCCTCGTGGACCGCCAGGTGAAGAGAGCAGCAGAGAGCATTTGATTGTTCCTCCTCACTTTACTGATCACCCTGATCTGAAATTGCAACACTGTACATTACAAATCCTATGA 876 0.4966 MISRITHIHVLVFFLLLSAVVHAQSSSPPVASPKVTPHNLVYPSFDPVVVAFICFFLFISCCSIYLRHCSTINLAAGNLTPTTTNCSSNDPQGVDPKLLDTFPIFLYSAVKHLKFGKAPLECAVCLSEFNHQDTLRLLPKCNHVFHPQCIDAWLASHVTCPVCRSRLMPAEEEHHGGENEVVIVIPNDVNAHQVFDECSVSRTELNSGNGKCLGRCHSTGHSLGLREIGGKDTKRYTILMSENHGGMRRSASYEVPRGPPGEESSREHLIVPPHFTDHPDLKLQHCTLQIL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1350 291 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 170 IPR013083 -
Prci1g1350 291 SUPERFAMILY RING/U-box 116 170 - -
Prci1g1350 291 SMART ring_2 122 163 IPR001841 -
Prci1g1350 291 FunFam E3 ubiquitin-protein ligase ATL6 82 170 - -
Prci1g1350 291 ProSiteProfiles Zinc finger RING-type profile. 122 164 IPR001841 -
Prci1g1350 291 PANTHER RING FINGER DOMAIN-CONTAINING 35 171 - -
Prci1g1350 291 CDD RING-H2_EL5-like 121 164 - -
Prci1g1350 291 Pfam Ring finger domain 121 164 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1350 Prci-Chr1 29737235 29738110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1350 11 243 Rapid Response to Elicitors AT3G05200 39.062 1.10e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1350 K10664 - pcin:129287042 247.284