LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1g1348	ATGATCAAGAGAGTCACACTCTCACACATCGTCGTCTTCTTGCTGTTATCATCGGCCGTCGTCGATGCCAAGTCAGCTCCGCAACCGGAAGCTCCTGGTAATCCTACAAGATTCCCCAACTGGGACCCATCATTCACTCCAGTGATTGCGGCCCTCGTCTGCGCCTTCTTGTTCGTTGTCTTCTTCTCCGTCTACCTCCGTCACTGCTCCGACACCGACCTAGTAGTTGCTGGAAACACCACCGCCCATTGCACTTCTTGTAGCCGTCAAGGCATCGACCCGAAATTGCTCGACGGCTTCCCCATCCTCGTGTATTCTGCCGTCAAACACCTCAAGCGTGGGAGTGCAGCGCTTGAGTGTGCCGTGTGCTTGGGCGAGTTCGATCACCACGACAGGCTCCGATTACTTCCGACATGTAACCATGTGTTTCACCCTGAATGCATCGACGCATGGTTGGCCTCCCATGTGACTTGCCCCGTTTGTCGCGCGAGGCTGACACCGGAGCACCACCGTGGCGGCAGTGGCCGCGATGATGTCGTGATAGTGATTCAGGATGAGGCAAATGCACATCAAGTGCTTGATGAAAGTTCTGAGAGTAGAAGAAGAACGGAGCTTAATTCAGGAGATCAAAGTAGTAGTAGTTTGGGTAGGTGTCATTCAACGGGTCACTCTCTGAATTTGGTTGAAACAGTAGGGAAGGACATAGAGAGGTATACTCTGAGGTTATCGGAGGATGTGAGGAAGCAGATTCTGGCGAATCACGGAGGAGGAATGCGGCGTTCCTTGAGCTATAATGTATTCCGGCCGCCGGGACGGCCAGGTGAAGGAAGCAGTGGAGAGCAATTTGTGCGTTGA	855	0.5322	MIKRVTLSHIVVFLLLSSAVVDAKSAPQPEAPGNPTRFPNWDPSFTPVIAALVCAFLFVVFFSVYLRHCSDTDLVVAGNTTAHCTSCSRQGIDPKLLDGFPILVYSAVKHLKRGSAALECAVCLGEFDHHDRLRLLPTCNHVFHPECIDAWLASHVTCPVCRARLTPEHHRGGSGRDDVVIVIQDEANAHQVLDESSESRRRTELNSGDQSSSSLGRCHSTGHSLNLVETVGKDIERYTLRLSEDVRKQILANHGGGMRRSLSYNVFRPPGRPGEGSSGEQFVR	284

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1g1348	284	MobiDBLite	consensus disorder prediction	191	220	-	-
	Prci1g1348	284	MobiDBLite	consensus disorder prediction	206	220	-	-
	Prci1g1348	284	ProSiteProfiles	Zinc finger RING-type profile.	120	162	IPR001841	-
	Prci1g1348	284	SMART	ring_2	120	161	IPR001841	-
	Prci1g1348	284	CDD	RING-H2_EL5-like	119	162	-	-
	Prci1g1348	284	PANTHER	E3 UBIQUITIN-PROTEIN LIGASE ATL42	30	172	-	-
	Prci1g1348	284	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	99	171	IPR013083	-
	Prci1g1348	284	MobiDBLite	consensus disorder prediction	191	205	-	-
	Prci1g1348	284	FunFam	E3 ubiquitin-protein ligase ATL6	80	168	-	-
	Prci1g1348	284	MobiDBLite	consensus disorder prediction	259	284	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci1g1348	Prci-Chr1	29609433	29610287	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1g1348	11	253	Rapid Response to Elicitors	AT3G05200	39.382	4.39e-51	171

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1g1348	K10664		-	pcin:129287042	233.032

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