Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1306 ATGGCTCCGAAACAGCCGAGTACGGGTTTATTCGTTGGATTGAACAAGGGTCACGTTGTGACCAAGAAGGAATTGGCTCCTCGCCCGTCAGATCGAAAAGGGAAAACCAGCAAGAGGGTACACTTTGTAAGGAACATTATACGTGAGGTTGCTGGCTTTGCTCCCTATGAAAAGAGGATTACAGAGCTTTTGAAGGTTGGCAAGGATAAGAGAGCATTGAAAGTTTCAAAGAGAAGGTTGGGTACCCATAAGAGAGCTAAGAAGAAGCGTGAGGAGATGTCTAATGTGCTCCGAAAGATGAGGGCTGGCGGAGCTGGTGACAAAAAGAAGTGA 333 0.4685 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNIIREVAGFAPYEKRITELLKVGKDKRALKVSKRRLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1306 110 PANTHER 60S RIBOSOMAL PROTEIN L36 1 108 IPR000509 GO:0003735|GO:0005840|GO:0006412
Prci1g1306 110 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Prci1g1306 110 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Prci1g1306 110 FunFam 60S ribosomal protein L36 1 106 - -
Prci1g1306 110 MobiDBLite consensus disorder prediction 87 110 - -
Prci1g1306 110 Gene3D 60S ribosomal protein L36 1 108 IPR038097 -
Prci1g1306 110 MobiDBLite consensus disorder prediction 80 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1306 Prci-Chr1 28974795 28976453 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1306 1 110 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 78.182 3.58e-57 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1306 K02920 - cave:132189827 213.386