Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1291 ATGGCGTCTCCCAATAGCTCTCTGAAAATACTTGAGGTCTGCAAAGTCGCTCCGCCACCATCTTCACATAAGTCCTCTTTCCCTCTCACCTTCTTCGACTTGCTTTGGCTTAGACTTCATCCTGTTGAGCGTCTCTTCTTCTTCCCTGTTCCTCACTTAAACTCTTCTTCCTTCTTCCATTCCATCGTCCCAAAGCTCAAACGCTCCCTCTCTCTCGTTCTCTATCACTTTCTTCCTCTCGCCGGTAACATCGTCTGGCCCTCCGATGACTCACTCAAACCCATCGCCCAATACTCTCCCGGCGACGCAGTCTCTCTCACCATAGCAGTGTCTGATTCTGACATGACCAATCTCATTGATAACTCTCCTCGTGAGGCCGTGCAGTGTCGTCCTTTCATACCGAATTTAGAGTCACGTGATTCATCTGCTTCGGCTCTTTCACTGCAAATCACTCTGTTTCCCAACAGTGGATTTTGCATAGGCATGAGCTCACACCATGCCTGTTTGGATGGAAAATCTTCATCTATGTTCATCAAGGCCTGGGCTTATCTATGTCGAATGACAGAAGCTGATGATGCAGAAAGTGAATCTTCTTCTTCTGGTTTGCTTCCTCCAGAACTACAACCATTCTTAGACAGGGAAGTTATCCTCGATCCACGTGGCCTTGCAGTCGCATACATTAATGGATGGTCAGGTTTAGATCCCACTGGTCAGACTCAGAAGAACCGGCCAAGCTTGAAGATTCTGTCCGACATGTTCCCACTGATAGTGGATGACTCGGCTCGAGCCATATTCGAGCTGAAACGAGGAGATCTAAACAAGATAAAGGAAAGAGTGTTGCAGAAGTGGGAGATCAATCACAAGGCGACAGAAGAAGAAAGAGAAGACTCATCATCATCACTTTCAAAGCCTCCAACTTTATCAGCCTTTGTACTTACAGCATCTTATGTTCTGGTCTGCATTGCAAAAGCCATTGAAAGAACTTGCGAGAACAAGACAAGGAAACTGTTATTCTGTTTCCCAGCTGATTGTAGGTCAAGGTTAGAGCCTCCAATTCCTGAAAACTATTTTGGAAATTGCGTGATGCCCAACATAATAGAAACACGAGAGGAAGACTTCACCGACGACGGTGATGGGGTGGTCATCGTTGCCAAGAAAATACACACAAAGATCAGGAAAATACAGAGAGAGAGAGGAGCGCTTGAAGGAGCAGAGACACTGTTTTGTAGGTATTCTTTGGAATCTGGGGAAGAAATTGAAATTCAGTACATAGCAGTGGCCGGGTCGAACCGGTTTGGGGTTTATGAGACTGACTTTGGGTGGGGAAGGCCTGAGAAAGTGGAGATAACTTCGGTGGACAAGAATATAACAATGGCCTTGGCAGAGAGTAAAGATGGTAATGGAGGTGTTGAAGTTGGACTCGTTTTGAAGAAGAATGTGATGGATCGATTTGCTTCCTTGTTTCAAACAGAGATGGAGTCTATCTGA 1488 0.4583 MASPNSSLKILEVCKVAPPPSSHKSSFPLTFFDLLWLRLHPVERLFFFPVPHLNSSSFFHSIVPKLKRSLSLVLYHFLPLAGNIVWPSDDSLKPIAQYSPGDAVSLTIAVSDSDMTNLIDNSPREAVQCRPFIPNLESRDSSASALSLQITLFPNSGFCIGMSSHHACLDGKSSSMFIKAWAYLCRMTEADDAESESSSSGLLPPELQPFLDREVILDPRGLAVAYINGWSGLDPTGQTQKNRPSLKILSDMFPLIVDDSARAIFELKRGDLNKIKERVLQKWEINHKATEEEREDSSSSLSKPPTLSAFVLTASYVLVCIAKAIERTCENKTRKLLFCFPADCRSRLEPPIPENYFGNCVMPNIIETREEDFTDDGDGVVIVAKKIHTKIRKIQRERGALEGAETLFCRYSLESGEEIEIQYIAVAGSNRFGVYETDFGWGRPEKVEITSVDKNITMALAESKDGNGGVEVGLVLKKNVMDRFASLFQTEMESI 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1291 495 Pfam Transferase family 16 487 - -
Prci1g1291 495 Coils Coil 273 293 - -
Prci1g1291 495 Gene3D - 257 495 IPR023213 -
Prci1g1291 495 Gene3D - 7 240 IPR023213 -
Prci1g1291 495 PANTHER - 8 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1291 Prci-Chr1 28532880 28534939 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1291 33 484 Monolignol Biosynthesis Gene Families AT5G48930 23.529 3.25e-18 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1291 - - pcin:129292507 747.273