Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1290 ATGGCGTCTCCCAACATTTCTGTGAAAATAATTGACCTCTGCAAAGTCGCTCCGCCACCATCTTCACGTGAGTACTCTTTCTCTCTCACATTCTTCGACTTGCTTTGTCTCAGAGTTCATCCTGTTGAGCGTCTCTTCTTCTTCTCCGTTCCTCACTTACAGTCTTCTTCCTTCTTCCATTCCATCGTCCCAAAGCTCAAACGCTCCCTCTCTCTCGCTCTTCAACACTTTCTCCCTCTTGCCGGCAACATCGTCTGGCCCTCCGACGACTCACTCAAACCCATCGTCCAATACTCTCTCGGCGACGCAGTCTCTGTTGCCATAGCAGTTTCTGATTCTGATATGACCAATCTCATAGATAACTCTCCTCGTGACGCAATGCAGTCTCGTCCTTTCATACCGAATTTAGAGACACGTGATTCATGTGCTTCCGTTCTTTCCCTGCAAATCACTCTGTTTCCCAACAGCGGATTTTGCATTGGCATGAGCTCACACCATGCCGGTTTAGATGGCAAGTCATCGTTCTTGTTCATCAAGGCCTGGGCTTATCTATGTCGAATAACAGAGGCTCATGATGCAGAGAGTGAATCTTCTTCTTCTGGTTTGCTTCCCCCAGAACTTCAGCCATTATTAGACAGGGAAGTTATCCTCGATCCACGTGGCCTTGCAGTCGCATACATTAATGGGTGGTCAGGTTTTGATCCCACTGGTCAGACTCAGAAGAACAGGCCAAGCTTGAAGATTCTGTCTAACTTGTTCCCGCCGCTAGTGGACGACTCGGCTCGAGCCATATTCCAGCTGAAACGAGGAGATTTAAACAAGATAAAGGAAAGAGTGTTGCAGAACTGGGAGATCAATCACAAGTTGAAAGAAGAAAGAGAAGACTCATCATCAATTTCAAAGCCTCCAACTTTATCAGCATTTGTGCTTACAACTTCTTATGTTCATGTCTGCATTGCCAAAGCCATTGAAAGAACTGAAAATAAGAGAAAGAAACTGTTATTCTGCCTCGTAGCTGATTGTAGGGCCAGGTTAGAGCCTCCAATCCCTGAAAACTACTTTGGGAATTGCGTGATGTCTCATATTATAGAAACACAACCGGATGAGGAATATGGGGTAGTCATGGTTGCTAAGAAAATACACAGAAGGATAACGAAAATACAAAAAGAGAAAGGAGTGCTTGACGGAGCAGAGACACTGTCTACAAGGAGTGTTTCGCGATCTGGAGAAGGAAAGGAAGTTCAATACATAGCAGTAGCCGGGTCGAACCGGTTTGGGGCTTATGAGACTGATTTTGGATGGGGAAGGCCAGAGAAAGTGGACATCATTTCTGGGGATAGAGGTATAGTAATGGCGATGGCAGAGAGCAAAGCTGGTGATGGAGGGGTGGAAGTGGGAATCGTAATGAAGAACCATGTGATGGATCAATTTGCTTCCCTTGTTCGATCAGAGATTGAGTGTATTTGA 1467 0.4574 MASPNISVKIIDLCKVAPPPSSREYSFSLTFFDLLCLRVHPVERLFFFSVPHLQSSSFFHSIVPKLKRSLSLALQHFLPLAGNIVWPSDDSLKPIVQYSLGDAVSVAIAVSDSDMTNLIDNSPRDAMQSRPFIPNLETRDSCASVLSLQITLFPNSGFCIGMSSHHAGLDGKSSFLFIKAWAYLCRITEAHDAESESSSSGLLPPELQPLLDREVILDPRGLAVAYINGWSGFDPTGQTQKNRPSLKILSNLFPPLVDDSARAIFQLKRGDLNKIKERVLQNWEINHKLKEEREDSSSISKPPTLSAFVLTTSYVHVCIAKAIERTENKRKKLLFCLVADCRARLEPPIPENYFGNCVMSHIIETQPDEEYGVVMVAKKIHRRITKIQKEKGVLDGAETLSTRSVSRSGEGKEVQYIAVAGSNRFGAYETDFGWGRPEKVDIISGDRGIVMAMAESKAGDGGVEVGIVMKNHVMDQFASLVRSEIECI 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1290 488 Gene3D - 257 488 IPR023213 -
Prci1g1290 488 PANTHER - 8 485 - -
Prci1g1290 488 Gene3D - 7 241 IPR023213 -
Prci1g1290 488 Pfam Transferase family 8 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1290 Prci-Chr1 28523244 28525086 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1290 33 481 Monolignol Biosynthesis Gene Families AT5G48930 23.605 2.98e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1290 - - pcin:129292507 960.674