Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1289 ATGGCTGTCTTTGCTCTGATGGTTGAAGAGACTTGTCAGAATGATGCTGCAACCAACGATCCAGATCCTCTCAAAAGCATCAATATCTCCGCCACCATCTTCACCCAAGTCCTCTTTCTCTCTCTCCTTCTTCGACTTGCTTTGGCTCAGATCTCATCCTGTCAAGCGTCTCTTCTTCTTCTCTGTTCCTCACTTACAATCTTCTTCCTTCTTCGATTCCATCGTTCCCAAGCTCAAACGCTCCCTCTCTCTCTCTCTCTCCAACACTTTATTCCTCTCGCCGGAAATATTATTTGGCCTTCCGATTCCGACTCAGTCAAACCCGTCGTCCGATACGCTCCAGGAGATGCTGTCTCTCTCACCATAGCAGCTTCTGATTCTGATTTCAGCCATTTCTTGGATAACTCACCTCGCGACGCCTCCGAGTCTCGTGCTTTCGTGCCGAACTTAGATTCATCTGATTCATCTGCTTCGGTTCTTTCGCTGCAAATCACTCTGTTTCCCGACAGCGGATTTTGCATAGGCATCAGCGCTCACCGTGCCTGTTCGGATGGAAAATCTTCATCTATGTTCATCAAGACAGGGAAGTTATCCTCGATCCACGTGGACTTTGCCTCTGCATACATTAATGATCAGACTCAGAAGAACCGGCCAAGCTTGAAGATTTTATCCGAAGTGTTCCGGCCGAAAGTGGACGACTCGGATCGAGCCATATTCGAGCTTAGACGTGGAGTTTTGGAGAAGATAAAGGAAAGGGTATTACAGAAATGGGAGAATCATCACAAGGTGAAAGAAGAGATCCCAGAAGAATCATTAGCACTTTCAAAGCCTCAAACTTTATCAACCTTTGTGCTCACAACTGCTTATGTTTGGGTCTGCTTCGCCAAAGCCATGGAAAGAATAACTGAACAGAAGACAAAGAAAGTGTTATTGGGGTTCGTAGTTGATTGCAGGAACAGGTTAGAGCCTCCAATCCCTGAAAACTATTTTGGAAATTGCGTGATGTCTCAAGTGACAGAAACACTTCTCGAAAACCTTACCAATGAAGATGGGATAGTGATAGCAGCTAAGAAAGTACACGGAAAGACAATGAAAATGCAGAAAGAGAACGGCGTGCTTCATGGAGCAGAGACGTTGTTCTCAAAGTTTTCTTACGCGAGAAATGAAGAGAACCGAGCTATATGCATAGGAGTAGCCGGGTCGACGCGGTTTGGGGTTTATGGAGCGGACTTTGGATGGGGAAGGCCTGAGAAGGTGGAGATAACGTCGGTGGACAGAAATGTAACAATGGCGATGGCAGAGTGTAAAGATGGTAATGGAGGGGTGGAAGTTGGACTCGTTCTGAAGAAGAATGTGATGGAACAATTTGCTTCGCTGTTTCGATCGGAGATGGAGTCTTTTTGA 1404 0.4608 MAVFALMVEETCQNDAATNDPDPLKSINISATIFTQVLFLSLLLRLALAQISSCQASLLLLCSSLTIFFLLRFHRSQAQTLPLSLSLQHFIPLAGNIIWPSDSDSVKPVVRYAPGDAVSLTIAASDSDFSHFLDNSPRDASESRAFVPNLDSSDSSASVLSLQITLFPDSGFCIGISAHRACSDGKSSSMFIKTGKLSSIHVDFASAYINDQTQKNRPSLKILSEVFRPKVDDSDRAIFELRRGVLEKIKERVLQKWENHHKVKEEIPEESLALSKPQTLSTFVLTTAYVWVCFAKAMERITEQKTKKVLLGFVVDCRNRLEPPIPENYFGNCVMSQVTETLLENLTNEDGIVIAAKKVHGKTMKMQKENGVLHGAETLFSKFSYARNEENRAICIGVAGSTRFGVYGADFGWGRPEKVEITSVDRNVTMAMAECKDGNGGVEVGLVLKKNVMEQFASLFRSEMESF 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1289 467 Pfam Transferase family 83 458 - -
Prci1g1289 467 SUPERFAMILY CoA-dependent acyltransferases 261 465 - -
Prci1g1289 467 Gene3D - 233 466 IPR023213 -
Prci1g1289 467 PANTHER - 83 466 - -
Prci1g1289 467 Gene3D - 59 209 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1289 Prci-Chr1 28495411 28499789 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1289 73 456 Monolignol Biosynthesis Gene Families AT5G48930 23.210 1.40e-16 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1289 - - pcin:129286077 875.93