Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1287 ATGGCGTCTTCCAATCCCTCCCTGAAAATACATGAGCTCTGCAGAATAGCTCCGCCACCATCTTCACCCAAGTCCTCTTTCTCTCTCTCCTTCTTCGACTTGCTTTGGCTCAGATTTCATCCTGTCGAGCGTCTCTTCTGCTTCTCTGTTCCTCACTTAAAATCTTCTTCCTTCTTCGATTCCATCGTTCCCAAGCTCAAACGCTCCCTCTCTCTCGCTCTCCAACACTTTCTTCCTTTTGCCGGAAATATCGTTTGGCCTTCCGATTCCGACTCAGTCAAACCCATCGTCCGATACACTCCAGGAGACGCTGTCTCTCTCACCATAGCAGTTTCTGATTCTGATTTCAGCCATTTCTTGGATAACTCACCTCGCGACGCGTCCGAGTCTCGTGCTTTCGTGCCGAACTTAGATTCATCTGATTCATCTGCTTCGGTTCTTTCCCTGCAAATCACTCTGTTTCCCAACAGTGGATTTTGCATCGGCATCACCGCACACCATGCCTGTTCGGATGGAAAATCTTCATCTATGTTCATCAAGGCCTGGGCTTATCTATGTCGAATAACAGAAGCCGATGCAGAGAGTGAATCTTCTTCTGGTTTGCTTCCACCAGAACTTCAACCATTCTTAGACAGGGAAGTTATCCTCGATCCACGTGGCATTGCCTCTGCATACATTAATGGGTGGACGTGGTCATCATCAGGTTTAGATCCCAATGATCAGACTCAGAAGAACCGGCCAAGCTTGAAGATTTTGTCCGAAGTGTTCCCGCCGAAAGTGGACGACTCGGATCGAGCCATATTCGATCTCAGACGTGGAGTTTTGGAGAAGATAAAGGGAAGGGTATTACAGAAATGGGAGAGTCTTGACAAGGTGAAAGAAGAGATCACAGTAGAATCATTAGCACTTTCAAAGCCTCAAACTTTATCAACCTTTGTGCTCACAACTGCTTATGTTTGGGTCTGCTTCGCCAAAGCCATGGAAAAAATAGCTGAACAGAAGACAAAGAAAGTGTTATTGGGGTTCGTAGTTGATTGCAGGAACAGGTTAGAGCCTCCAATCCCTGAAAACTATTTTGGAAATTGCGTGATGTCTCAAGTGACAGAAACACTTCCCGAAAACCTTACCAATGAAGATGGGATAGTGATAGCAGCTAAGAAAGTATACGGGAAGATAATGAAAATGCAGAAAGAGAACGGTGTGCTTGATGGAGCAGAGACGTTGTTCTCAACGTTTTCTTACGTGAAAGATGAAGAGAACCGAGCTATATGCATAGGAGTAGCCGGGTCAACCCGGTTTGGGGTTTATGGAGTGGACTTTGGATGGGGAAGGCCTGAGAAGGTGGAGATAACGTCGGTGGACAGAAATATAACAATGGCGATGGCAGAGAGTAAAGATGGTAATGGAGGGGTGGAAGTTGGACTCGTTCTGAAGAAGAATGTGATGGAACAATTTGCTTTACTCTTTCGATCGGAGATAGAGTCTATTTGA 1491 0.4588 MASSNPSLKIHELCRIAPPPSSPKSSFSLSFFDLLWLRFHPVERLFCFSVPHLKSSSFFDSIVPKLKRSLSLALQHFLPFAGNIVWPSDSDSVKPIVRYTPGDAVSLTIAVSDSDFSHFLDNSPRDASESRAFVPNLDSSDSSASVLSLQITLFPNSGFCIGITAHHACSDGKSSSMFIKAWAYLCRITEADAESESSSGLLPPELQPFLDREVILDPRGIASAYINGWTWSSSGLDPNDQTQKNRPSLKILSEVFPPKVDDSDRAIFDLRRGVLEKIKGRVLQKWESLDKVKEEITVESLALSKPQTLSTFVLTTAYVWVCFAKAMEKIAEQKTKKVLLGFVVDCRNRLEPPIPENYFGNCVMSQVTETLPENLTNEDGIVIAAKKVYGKIMKMQKENGVLDGAETLFSTFSYVKDEENRAICIGVAGSTRFGVYGVDFGWGRPEKVEITSVDRNITMAMAESKDGNGGVEVGLVLKKNVMEQFALLFRSEIESI 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1287 496 Gene3D - 262 495 IPR023213 -
Prci1g1287 496 Pfam Transferase family 14 486 - -
Prci1g1287 496 PANTHER - 8 494 - -
Prci1g1287 496 SUPERFAMILY CoA-dependent acyltransferases 293 399 - -
Prci1g1287 496 Gene3D - 8 239 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1287 Prci-Chr1 28436589 28438203 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1287 8 485 Monolignol Biosynthesis Gene Families AT5G48930 24.124 1.20e-22 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1287 - - pcin:129286077 645.58