Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1272 ATGGTTAGCTTCAGCAATAACGACGCTGTCTTCACAATGACCATTTCACTGTCACTCTCCTCGCCGTTCTTCTTCTTCTTCTTCCAACTCCTTTTCACCGTCCGGACCACCTCCTTCAGTCCTGTTGATCATTTCGCCGTCGCCTGCGGTAACTTAGGAAATATTCGGTCATCGGATAACCGGAACTGGACCGGAGATATTGGCTCCAGAATATTCTCTCCCATTGAACCCCGCAACGGCCTCCACTCCGTCGTCGTCAACGCATCGGTCAGAAAAACAGTCCCCTACGGCACCGCACGCCTCTCTTACTCTGAATTCTCCTACTCATTCCCGGTGACCTCCGGCCGGAAAATCATTCGCTTCTACTTTTACCCATCTTCCTACGACCTCAACTTCCTTCGCTCTGACTCTCTCTTCTCCGTCAAAGCAAGTTCCTTACCCCTTCTTATGGACTACAACGCTTCACTTGCCGCCGACAAAGCTGCCGAAGAAACCTTTTTCAAAGAGTACGTCGTCACCGTTGACCCAGGTCAGAGGCTAAATGTAACCTTCATGCCCAGTGTATCTTATGAAAACGCTTATGCTTTTATCAATGGGATTGAGGTTTTCTCTTCGCCAACTGATCTTTATTACCCCAACCTAGACAATATAATAACAGGTTCCAATCCTGTTTCACGCCCATCTCCCTCACTACCATCATCGAAATCATCAAAGAATGCAAAGAACACGAGGGTAATTTTCATTGTTGGAGGGGTAGCTTCAGGCATCGTTGTGCTTTCTCTTATTCTTTTGCTGATTTTTCTGCGATTCGCTAAAGGTTCAGTAAAGGAAGGAAAATCATGGTGGGGACAGAAAACAGTAGCCATGTCCAAAACAAGAAAGACCCAAGGGACTTCATTATTGTCGTCTGATTTGTGTCGTGTCTTTTCAATAGACGAGATAAGAGCAGCGACGAATAATTTCGATGATATTTTTATCATCGGTTTCGGAGGGTTTGGTAATGTGTACAAAAGCTACATTGATGAAGGTACAATACCAGTGGCAATCAAACGTCTCAAACAAGGTTCACAACAAGGACTGCAGGAGTTTCAAACTGAGATTGAAATGCTCTCACAACTTCGTCACAATCATTTAGTGTCTCTCATTGGTTACTGCAACGAAGGCAATGAGATGATCCTTGTCTACGAGTTCATGGCTAACGGAACTCTACGTGAGCATCTTTACAATTCTGATCACCACTCACTTTCCTGGATTCAAAGGTTAGAGATATGCATAGGTGCTGCACGAGGAATACATTATCTACACACAGGTACAAAGCATGCAATCATTCACCGGGACATCAAAAGCACAAACATATTAATAGATGAGAAATGGATGGCGAAGATTTCAGATTTCGGGTTGTCCAAAGTAGGACCCTCGGGTATTTTGAGATCGAACATTAATATAAGCACCGTAGTGAAAGGAAGCATTGGATATTTAGATCCAGAATACTGCATGTGTCAAAGATTGACGGAGAAGTCAGACGTGTACTCATTTGGAGTGGTGTTACTGGAGGTATTGTGTGGGAGGCCTCCTATTTTGCGTGCAGTGGAGAGGCAGCAGCAAAACTTGGCAGAGTGGGTTCGAAGATGTGTTCACGAAGGTGAGATCGGTCCTGCCGTTGATCCATTTCTCAGAGAAAGTATGAGGCCAGATTGCATAGAGGCATACATTGAAATTGCATTGAAGTGTGTGGCCAATGATGGGAATGAACGGCCAGCCATGGGTGATGTGATGCTGGGCCTAGAGTTTGTATTGGAGATGTTGAGGAATGAAGAGGAGATTAGTTCTGATGATTGA 1839 0.4486 MVSFSNNDAVFTMTISLSLSSPFFFFFFQLLFTVRTTSFSPVDHFAVACGNLGNIRSSDNRNWTGDIGSRIFSPIEPRNGLHSVVVNASVRKTVPYGTARLSYSEFSYSFPVTSGRKIIRFYFYPSSYDLNFLRSDSLFSVKASSLPLLMDYNASLAADKAAEETFFKEYVVTVDPGQRLNVTFMPSVSYENAYAFINGIEVFSSPTDLYYPNLDNIITGSNPVSRPSPSLPSSKSSKNAKNTRVIFIVGGVASGIVVLSLILLLIFLRFAKGSVKEGKSWWGQKTVAMSKTRKTQGTSLLSSDLCRVFSIDEIRAATNNFDDIFIIGFGGFGNVYKSYIDEGTIPVAIKRLKQGSQQGLQEFQTEIEMLSQLRHNHLVSLIGYCNEGNEMILVYEFMANGTLREHLYNSDHHSLSWIQRLEICIGAARGIHYLHTGTKHAIIHRDIKSTNILIDEKWMAKISDFGLSKVGPSGILRSNINISTVVKGSIGYLDPEYCMCQRLTEKSDVYSFGVVLLEVLCGRPPILRAVERQQQNLAEWVRRCVHEGEIGPAVDPFLRESMRPDCIEAYIEIALKCVANDGNERPAMGDVMLGLEFVLEMLRNEEEISSDD 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1272 612 ProSitePatterns Protein kinases ATP-binding region signature. 327 350 IPR017441 GO:0005524
Prci1g1272 612 Pfam Malectin-like domain 48 210 IPR024788 -
Prci1g1272 612 FunFam FERONIA receptor-like kinase 44 206 - -
Prci1g1272 612 Gene3D Phosphorylase Kinase; domain 1 281 397 - -
Prci1g1272 612 FunFam Receptor-like protein kinase FERONIA 398 612 - -
Prci1g1272 612 FunFam Receptor-like protein kinase FERONIA 292 397 - -
Prci1g1272 612 SMART serkin_6 321 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1272 612 ProSiteProfiles Protein kinase domain profile. 321 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1272 612 Gene3D - 44 207 - -
Prci1g1272 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Prci1g1272 612 Pfam Protein tyrosine and serine/threonine kinase 327 591 IPR001245 GO:0004672|GO:0006468
Prci1g1272 612 CDD STKc_IRAK 334 591 - -
Prci1g1272 612 Gene3D Transferase(Phosphotransferase) domain 1 398 611 - -
Prci1g1272 612 PANTHER OS07G0166700 PROTEIN 305 601 IPR045272 GO:0004714|GO:0006468
Prci1g1272 612 SUPERFAMILY Protein kinase-like (PK-like) 296 597 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1272 Prci-Chr1 27149525 27151607 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1272 64 607 Receptor kinase-like Gene Family AT3G51550 43.826 8.16e-136 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Prci1g1272 PK_Tyr_Ser-Thr 9.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1272 - - pcin:129312618 1133.63