Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1271 ATGCCCTCCTATCTTTACTACACTAGACTTGATGACCCACAGGCTATGCTGCAAGATGGCGGAACCATCCAGTTTCCTGTCAAAAACAAAAGTGCTCTTGAGACAGTGTACAGAATCAATGTTGGTGGAAGGCAGATGGCTCCCAATCAAGATACTGGCATGTTTAGAACTTGGGACCCAGATAATCCATACTTAGAGAAGGAGCGCCCACACAGTGTATCAGCAGCTTTTGGCAATCAGAGTCTAACACACGAAGATGGTCAAAATTATTTTGCACCAGATGAAGTATACAAGACTGCTCGAAACTACGGGATGAAAGAAACATCCAAATTTAATGTGACCTGGGAGTTTCAAGTGGACTCAGAGTTTACTTACATGGTGAGATTGCATTTTTGTGAGTTTGACAAACACATTCAAAATGTTGGAGACAGAGTTTTCCAAATTTTCATAGATGATGCTTTGGTGGAAAATATCGCGGATGTAATGATATGGAGTAGCAAGCAGATTTTGGTTCCTGTCCATAGGGACTATGCAGTGTCCATGCAGGGCAAAGGAAGCTTGAAGAAACTGAATCTAACAATTAAGTTGCAACCACACCCATATGCAAGAAGCACTTACAGAGACGTTTTATTGAATGGTATTGAAATTCTGAAGATAAGTGACTTCAAATACAATCTCGGAGGTGCCAATCCTGATCAACTTCCTTCTCCCCCACTACTTCCGAAGGCATCTAAAAACCCACCAAAAAAGAGGGTAATTTCTATAGTTGTCGGGGCGGCTTCCAGTTTCATTCTTCTCTCTCTCATCGTTTTGTTCATTTTCTATCGATTATTGGCTAGAGGTGTAATCAACGAAGGGAATTCACGATGGGGATATGAACCAACATTGACATCAAAAACAAATAAATCCTCATTTTTGTTATCTGACTTGAGTCGCTGCTTTTCATTAGATGAGATTATAGCAGCCACTAATAATTTTGATGATAATTTGATTATTGGTGTTGGAGGGTTTGGTAATGTTTATAGGGGCCACATTGACAATGGTTCAGTTTCAGTGGCAATCAAACGGCTCAAAGAAGGTTCACAACAAGGGCTCAAAGAAGGTTCACAACAAGGGCTCAAAGAATTCCAGACTGAGATTGAATTGCTCTCACAACTTCGTCACCATCATTTGGTATCTCTCATTGGTTACTGCAAAGATGACAATGAGATGATCCTCGTTTACGAGTTCATGGCTCGTGGGACCTTTCGTGAGCATCTTTATGATTCTAATAACCAGCCACTTTCTTGGACACAAAGGGTCGAGATTTGCCTAGGTGCTGCTCGAGGATTGCATTATCTACATACAGGGGCAAAACATGCAATCATTCATCGTGACGTCAAGTCGACAAACATCTTAATGGATGAAAATTGGATGGCCAAGATTTCTGATTTTGGACTATCAAAGGTAGGACCCTCAGGTATTTCAAGATCTAACATTAACATAAGCATTGGTTATTTGGATCCAGAATACTATACGTTGCAAGTATTGACTGATAAGTCAGACGTGTACTTATTTGGTGTGCTCTTGCTGGAGGCATTGTGTGGGAGGCCTCCTATTCTCCGTGCTGTGGGGAGGGAACGACAAAACCTTGTAGAGTGGTTTCGAAGATGTGTTGATGAGAATCAGATTTATGACACGGTGGATCCATTCTTGAGGGAAAGCGTGACTCCAGAGTGCTTAAAGGTATACACAAAGATTGCATTGAAATGCTTAGATAATAATGGGAATGAACGGCCATCCATGGGAGATGTGATGTTGGGCCTCGAGTATTTGATAGAGATGCTAAACAAAGCAGAGAAGACAAAGCTTGGTGGGACTCTGAATGAAGAGATTATTGTTGAAGAAGGATCAGGATCTAGTAGGTGA 1908 0.4135 MPSYLYYTRLDDPQAMLQDGGTIQFPVKNKSALETVYRINVGGRQMAPNQDTGMFRTWDPDNPYLEKERPHSVSAAFGNQSLTHEDGQNYFAPDEVYKTARNYGMKETSKFNVTWEFQVDSEFTYMVRLHFCEFDKHIQNVGDRVFQIFIDDALVENIADVMIWSSKQILVPVHRDYAVSMQGKGSLKKLNLTIKLQPHPYARSTYRDVLLNGIEILKISDFKYNLGGANPDQLPSPPLLPKASKNPPKKRVISIVVGAASSFILLSLIVLFIFYRLLARGVINEGNSRWGYEPTLTSKTNKSSFLLSDLSRCFSLDEIIAATNNFDDNLIIGVGGFGNVYRGHIDNGSVSVAIKRLKEGSQQGLKEGSQQGLKEFQTEIELLSQLRHHHLVSLIGYCKDDNEMILVYEFMARGTFREHLYDSNNQPLSWTQRVEICLGAARGLHYLHTGAKHAIIHRDVKSTNILMDENWMAKISDFGLSKVGPSGISRSNINISIGYLDPEYYTLQVLTDKSDVYLFGVLLLEALCGRPPILRAVGRERQNLVEWFRRCVDENQIYDTVDPFLRESVTPECLKVYTKIALKCLDNNGNERPSMGDVMLGLEYLIEMLNKAEKTKLGGTLNEEIIVEEGSGSSR 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1271 635 FunFam FERONIA receptor-like kinase 31 220 - -
Prci1g1271 635 Pfam Malectin-like domain 29 218 IPR024788 -
Prci1g1271 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Prci1g1271 635 PANTHER OS07G0166700 PROTEIN 311 607 IPR045272 GO:0004714|GO:0006468
Prci1g1271 635 Gene3D Transferase(Phosphotransferase) domain 1 411 623 - -
Prci1g1271 635 Pfam Protein tyrosine and serine/threonine kinase 332 599 IPR001245 GO:0004672|GO:0006468
Prci1g1271 635 ProSitePatterns Protein kinases ATP-binding region signature. 332 355 IPR017441 GO:0005524
Prci1g1271 635 FunFam receptor-like protein kinase FERONIA 292 410 - -
Prci1g1271 635 SUPERFAMILY Protein kinase-like (PK-like) 311 600 IPR011009 -
Prci1g1271 635 Gene3D Phosphorylase Kinase; domain 1 290 410 - -
Prci1g1271 635 Gene3D - 31 220 - -
Prci1g1271 635 ProSiteProfiles Protein kinase domain profile. 326 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1271 635 SMART serkin_6 326 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1271 635 CDD STKc_IRAK 332 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1271 Prci-Chr1 27025062 27028451 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1271 7 618 Receptor kinase-like Gene Family AT3G51550 45.327 1.90e-176 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Prci1g1271 PK_Tyr_Ser-Thr 4.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1271 - - pcin:129321450 1223.76