LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1g1263	ATGACCCCCACTTCCTTCTTCCCGATGCTTTCTTCTCCGTCAAAGCCGGGCCCCACGCCCTTCTTAAGGACTTCAACGTTTCACTTAACGCCGACCCTGGAGATTCAGAAAGAGCCATCGTACGAGAGTACTGCGTCAACATTGACCCAGGCTATGATGCTAGATGGCCAAACCATCCAGTTTCGTGTCAACAACAACAGTGCTCTCGAGACAGTGTACAGAACCAACGTTGGAGGGAGTCAGATCGCTTCCGATATTGATACTGGCATGTTTCGTTATTGGGACCAGGATCTTGCCTACTTGGAGAGCGGGGAGCGCCTGCATAGTGTATCAGACGGATTTGGGTTAAAGCCAAACTACAAAGATTATCCCAATTATACCTCACCAGATGAAGTATACATGACTGCTCGAAACTATGGGATGAATGAGACGTCCAAATTTAATGTGACTTGGGATTTTGAAGTCGACTCAGAGTTCACTTATATGGTGAGATTGCATTTTTGTGAATTCGATGAAAATATTAAAAATGCTGGATATAGAGTTTTTCAAATCTTTATAGCTGATAAGTTGGTGGAGGCTGTTGCCGATGTGTTTATGTGGAGTGGCTACCTGGTTCCTGTACATAAAGACTATGCCGTGTCGATGTGGAGCCAAGGAAGTTCAAAGAAGCTGAATCTTTCAATCAAGTTGCAACCACACCCGAGAGCAAGAAGCATATACAGAGATGTCTTATTGAACGGTATTGAAATTCTGAAAATAAGTGACCCGGCCAGTGATAATCTTGGAGGTCCTAATCCCGTTCCACGTCCATCTCCCTCAATACCAAACTTGCCATCACCCAAGTCCTCCAATAAAACAAGGGTAATTTCCGTTGTTGTTGGGGTAGCTTCGGGCTTCATTGTGCTATCTGTTGTTGTTTTGTTTATCATTCGGCAACGGACTAGATCTTCTGGGATTTGTTCTTTTTCGACGAGTCTATTGGTTTCTGTCCCCACCATGAACAAAAACAGTTCATGGTGGGGACAGAAACCAATAGACTCGTCGAAAAAGAACAAATCCCATGGTTCATCATTGCCATCCAATTTGTGTCGCTGCTTTTCAATAGATGAGATTAAAGCAGCCACAAGTAATTTTGATGATATTTTTATTGTGGGCGTTGGAGGGTTTGGTAATGTCTATAAAGGCTACATTGATGACGGTACGGTCCCTGTGGCAATCAAGCGTCTCAAGCAAGGCTCACAACAAGGGTTCCATGAATTCCAAACAGAGATTGAAATGCTCTCTCAACTTCGTCACAATCATTTAGTGTCTCTTATTGGTTACTGCAACGACGGCAACGAGATGATCCTCGTCTATGAGTTCGTGGCTCGTGGGACCCTCAGTGACCATATTTACGATACTGATAACCCTCCGCTTTCTTGGAAGCAAAGGTTGGGGATGTGCCTTGGTGCTGCGCGTGGGCTCCATTATCTTCACACTGGTGCGAACCACAATATCATTCACCGTGATGTGAAATCCACAAATATCTTGATAGATGAGAAATGGGTGGCTAAAGTTTCGGATTTTGGGTTGTCCAAGATAGGACCCATAGGGATGTCCAAGTCTCACATAAGCACAGTGGTGAAAGGAAGCATTGGTTACTTGGATCCAGAATACTATAAGCGTCAAAGGTTAACTCAGAAGTCTGACGTTTACTCCTTTGGAGTTGTGTTGCTGGAAGTATTGTGTGGGAGGCCTCCTTTGCGACGTAACGTGGAGAAGCAGAAATCAAGTTTAGTGGAGTGGGTCCGAAAATGCCACCGCGAGGGTGTGATTCATCAAACTGTTGACCCTTTCCTGATAGAAAGTATCACACCAGAGTGCTTAAAAGCATTCAGCGACATGGCACTCCAATGTTTAGTGGAAGATGGGAATGAACGGCCTTCAATGAACGACGTTGTGTGGGGCCTAGAGTTTGCGTTGCAGCTTCAGGAAGGGACAGAAGAATTAGTGGGGCTCGATGTGGCCGAGATTGAAGGAAAGAGCGAGGAAAGTGCTCTGCTGAGAAAAGCGACAAATGTGGAAGAAAGTAAAGTAGGGTTCACGAGCAGTGACGAATCGAAAGGCAGCAGGTTGACTACTTCAAGCAGTGAAGACCAGTCTTTACTTTCTGGGTCGATCTTCTCCGAGTTGGGTCATCCAACTGTTCGATGA	2193	0.4523	MTPTSFFPMLSSPSKPGPTPFLRTSTFHLTPTLEIQKEPSYESTASTLTQAMMLDGQTIQFRVNNNSALETVYRTNVGGSQIASDIDTGMFRYWDQDLAYLESGERLHSVSDGFGLKPNYKDYPNYTSPDEVYMTARNYGMNETSKFNVTWDFEVDSEFTYMVRLHFCEFDENIKNAGYRVFQIFIADKLVEAVADVFMWSGYLVPVHKDYAVSMWSQGSSKKLNLSIKLQPHPRARSIYRDVLLNGIEILKISDPASDNLGGPNPVPRPSPSIPNLPSPKSSNKTRVISVVVGVASGFIVLSVVVLFIIRQRTRSSGICSFSTSLLVSVPTMNKNSSWWGQKPIDSSKKNKSHGSSLPSNLCRCFSIDEIKAATSNFDDIFIVGVGGFGNVYKGYIDDGTVPVAIKRLKQGSQQGFHEFQTEIEMLSQLRHNHLVSLIGYCNDGNEMILVYEFVARGTLSDHIYDTDNPPLSWKQRLGMCLGAARGLHYLHTGANHNIIHRDVKSTNILIDEKWVAKVSDFGLSKIGPIGMSKSHISTVVKGSIGYLDPEYYKRQRLTQKSDVYSFGVVLLEVLCGRPPLRRNVEKQKSSLVEWVRKCHREGVIHQTVDPFLIESITPECLKAFSDMALQCLVEDGNERPSMNDVVWGLEFALQLQEGTEELVGLDVAEIEGKSEESALLRKATNVEESKVGFTSSDESKGSRLTTSSSEDQSLLSGSIFSELGHPTVR	730

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1g1263	730	MobiDBLite	consensus disorder prediction	259	284	-	-
	Prci1g1263	730	Gene3D	Phosphorylase Kinase; domain 1	341	454	-	-
	Prci1g1263	730	FunFam	Receptor-like protein kinase FERONIA	350	454	-	-
	Prci1g1263	730	Pfam	Malectin-like domain	56	252	IPR024788	-
	Prci1g1263	730	MobiDBLite	consensus disorder prediction	690	721	-	-
	Prci1g1263	730	Gene3D	Transferase(Phosphotransferase) domain 1	455	666	-	-
	Prci1g1263	730	SMART	serkin_6	378	653	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1g1263	730	ProSitePatterns	Protein kinases ATP-binding region signature.	384	407	IPR017441	GO:0005524
	Prci1g1263	730	Gene3D	-	67	254	-	-
	Prci1g1263	730	FunFam	FERONIA receptor-like kinase	67	254	-	-
	Prci1g1263	730	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	499	511	IPR008271	GO:0004672\|GO:0006468
	Prci1g1263	730	ProSiteProfiles	Protein kinase domain profile.	378	653	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1g1263	730	FunFam	Receptor-like protein kinase FERONIA	455	670	-	-
	Prci1g1263	730	PANTHER	OS07G0166700 PROTEIN	362	657	IPR045272	GO:0004714\|GO:0006468
	Prci1g1263	730	CDD	STKc_IRAK	384	647	-	-
	Prci1g1263	730	SUPERFAMILY	Protein kinase-like (PK-like)	352	652	IPR011009	-
	Prci1g1263	730	MobiDBLite	consensus disorder prediction	690	730	-	-
	Prci1g1263	730	Pfam	Protein tyrosine and serine/threonine kinase	384	647	IPR001245	GO:0004672\|GO:0006468
	Prci1g1263	730	MobiDBLite	consensus disorder prediction	263	277	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci1g1263	Prci-Chr1	26227901	26230527	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1g1263	33	730	Receptor kinase-like Gene Family	AT3G51550	46.101	0.0	594

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Prci1g1263		PK_Tyr_Ser-Thr	4.4e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1g1263	-		-	pcin:129293555	1018.07