Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1262 ATGAGAGAGACGCAGGCCTTCCTGTTATTCCTCTTCTTCCAACTCCTTTTCATCACTGTCCTGGTCACTTCATACACACCAGTTGAGAATTTTGCAGTCAACTGTGGTATCTCCGGCAATATTTCGTCTTTTGATAACCGGAAATGGACCGGAGATATTGGCTCCACTGAATTCTCTCTCATAGATCCCGACAAAGCCACCCAGTTTGTCAAAGCCGCCGATGCACAAGTCAGCAACCAAAATATCCCCGGCGGCACCGCACGGCTCTCTCGCTTGGAATTCTCCTACTCCTTTCCAGTGACCGACGGCCAAAAGTTTATTCGTCTCTACTTTTACCCATCTTCCTATGACCCCCACTTCCTTCTTCCCGATGCTTTCTTCTCCGTCAAAGCCGGGCCCCACGCCCTTCTTAAGGACTTCAACGTTTCACTTAACGCCGACCCTGGAGATTCAGAAAGAGCCATCGTACGAGAGTACTGCGTCAACATTGACCCAGGTCAGAGGCTGCTAAACATAACCTTCACTCCCAGCCGATCTCATCAAAATACCTATGCTTTCGTCAATGGGATCGAGGTTGTCTCCATGCCCTCCTATCTTTACTACACTAACCCTGAAGAACTACAGGCTATGATGCTAGATGGCCAAACCATCCAGTTTCGTGTCAACAACAACAGTGCTCTCGAGACAGTGTACAGAACCAACGTTGGAGGGAGTCAGATCGCTTCCGATATTGATACTGGCATGTTTCGTTATTGGGACCAGGATCTTGCCTACTTGGAGAGCGGGGAGCGCCTGCATAGTGTATCAGACGGATTTGGGTTAAAGCCAAACTACAAAGATTATCCCAATTATACCTCACCAGATGAAGTATACATGACTGCTCGAAACTATGGGATGAATGAGACGTCCAAATTTAATGTGACTTGGGATTTTGAAGTCGACTCAGAGTTCACTTATATGGTGAGATTGCATTTTTGTGAATTCGATGAAAATATTAAAAATGCTGGATATAGAGTTTTTCAAATCTTTATAGCTGATAAGTTGGTGGAGGCTGTTGCCGATGTGTTTATGTGGAGTGGCTACCTGGTTCCTGTACATAAAGACTATGCCGTGTCGATGTGGAGCCAAGGAAGTTCAAAGAAGCTGAATCTTTCAATCAAGTTGCAACCACACCCGAGAGCAAGAAGCATATACAGAGATGTCTTATTGAACGGTATTGAAATTCTGAAAATAAGTGACCCGGCCAGTGATAATCTTGGAGGTCCTAATCCCGTTCCACGTCCATCTCCCTCAATACCAAACTTGCCATCACCCAAGTCCTCCAATAAAACAAGGGTAATTTCCGTTGTTGTTGGGGTAGCTTCGGGCTTCATTGTGCTATCTGTTGTTGTTTTGTTTATCATTCGGCAACGGACTAGATCTTCTGGGATTTGTTCTTTTTCGACGAGTCTATTGGTTTCTGTCCCCACCATGAACAAAAACAGTTCATGGTGGGGACAGAAACCAATAGACTCGTCGAAAAAGAACAAATCCCATGGTTCATCATTGCCATCCAATTTGTGTCGCTGCTTTTCAATAGATGAGATTAAAGCAGCCACAAGTAATTTTGATGATATTTTTATTGTGGGCGTTGGAGGGTTTGGTAATGTCTATAAAGGCTACATTGATGACGGTACGGTCCCTGTGGCAATCAAGCGTCTCAAGCAAGGCTCACAACAAGGGTTCCATGAATTCCAAACAGAGATTGAAATGCTCTCTCAACTTCGTCACAATCATTTAGTGTCTCTTATTGGTTACTGCAACGACGGCAACGAGATGATCCTCGTCTATGAGTTCGTGGCTCGTGGGACCCTCAGTGACCATATTTACGATACTGATAACCCTCCGCTTTCTTGGAAGCAAAGGTTGGGGATGTGCCTTGGTGCTGCGCGTGGGCTCCATTATCTTCACACTGGTGCGAACCACAATATCATTCACCGTGATGTGAAATCCACAAATATCTTGATAGATGAGAAATGGGTGGCTAAAGTTTCGGATTTTGGGTTGTCCAAGATAGGACCCATAGGGATGTCCAAGTCTCACATAAGCACAGTGGTGAAAGGAAGCATTGGTTACTTGGATCCAGAATACTATAAGCGTCAAAGGTTAACTCAGAAGTCTGACGTTTACTCCTTTGGAGTTGTGTTGCTGGAAGTATTGTGTGGGAGGCCTCCTTTGCGACGTAACGTGGAGAAGCAGAAATCAAGTTTAGTGGAGTGGGTCCGAAAATGCCACCGCGAGGGTGTGATTCATCAAACTGTTGACCCTTTCCTGATAGAAAGTATCACACCAGAGTGCTTAAAAGCATTCAGCGACATGGCACTCCAATGTTTAGTGGAAGATGGGAATGAACGGCCTTCAATGAACGACGTTGTGTGGGGCCTAGAGTTTGCGTTGCAGCTTCAGGAAGGGACAGAAGAATTAGTGGGGCTCGATGTGGCCGAGATTGAAGGAAAGAGCGAGGAAAGTGCTCTGCTGAGAAAAGCGACAAATGTGGAAGAAAGTAAAGTAGGGTTCACGAGCAGTGACGAATCGAAAGGCAGCAGGTTGACTACTTCAAGCAGTGAAGACCAGTCTTTACTTTCTGGGTCGATCTTCTCCGAGTTGGGTCATCCAACTGTTCGATGA 2667 0.4567 MRETQAFLLFLFFQLLFITVLVTSYTPVENFAVNCGISGNISSFDNRKWTGDIGSTEFSLIDPDKATQFVKAADAQVSNQNIPGGTARLSRLEFSYSFPVTDGQKFIRLYFYPSSYDPHFLLPDAFFSVKAGPHALLKDFNVSLNADPGDSERAIVREYCVNIDPGQRLLNITFTPSRSHQNTYAFVNGIEVVSMPSYLYYTNPEELQAMMLDGQTIQFRVNNNSALETVYRTNVGGSQIASDIDTGMFRYWDQDLAYLESGERLHSVSDGFGLKPNYKDYPNYTSPDEVYMTARNYGMNETSKFNVTWDFEVDSEFTYMVRLHFCEFDENIKNAGYRVFQIFIADKLVEAVADVFMWSGYLVPVHKDYAVSMWSQGSSKKLNLSIKLQPHPRARSIYRDVLLNGIEILKISDPASDNLGGPNPVPRPSPSIPNLPSPKSSNKTRVISVVVGVASGFIVLSVVVLFIIRQRTRSSGICSFSTSLLVSVPTMNKNSSWWGQKPIDSSKKNKSHGSSLPSNLCRCFSIDEIKAATSNFDDIFIVGVGGFGNVYKGYIDDGTVPVAIKRLKQGSQQGFHEFQTEIEMLSQLRHNHLVSLIGYCNDGNEMILVYEFVARGTLSDHIYDTDNPPLSWKQRLGMCLGAARGLHYLHTGANHNIIHRDVKSTNILIDEKWVAKVSDFGLSKIGPIGMSKSHISTVVKGSIGYLDPEYYKRQRLTQKSDVYSFGVVLLEVLCGRPPLRRNVEKQKSSLVEWVRKCHREGVIHQTVDPFLIESITPECLKAFSDMALQCLVEDGNERPSMNDVVWGLEFALQLQEGTEELVGLDVAEIEGKSEESALLRKATNVEESKVGFTSSDESKGSRLTTSSSEDQSLLSGSIFSELGHPTVR 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1262 888 FunFam FERONIA receptor-like kinase 30 196 - -
Prci1g1262 888 MobiDBLite consensus disorder prediction 848 879 - -
Prci1g1262 888 PANTHER OS03G0124300 PROTEIN-RELATED 7 481 IPR046957 GO:0004672
Prci1g1262 888 Gene3D Transferase(Phosphotransferase) domain 1 613 824 - -
Prci1g1262 888 FunFam Receptor-like protein kinase FERONIA 508 612 - -
Prci1g1262 888 Pfam Malectin-like domain 33 410 IPR024788 -
Prci1g1262 888 MobiDBLite consensus disorder prediction 417 442 - -
Prci1g1262 888 Gene3D Phosphorylase Kinase; domain 1 499 612 - -
Prci1g1262 888 MobiDBLite consensus disorder prediction 848 888 - -
Prci1g1262 888 MobiDBLite consensus disorder prediction 421 435 - -
Prci1g1262 888 ProSitePatterns Protein kinases ATP-binding region signature. 542 565 IPR017441 GO:0005524
Prci1g1262 888 CDD STKc_IRAK 542 805 - -
Prci1g1262 888 SMART serkin_6 536 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1262 888 FunFam FERONIA receptor-like kinase 225 412 - -
Prci1g1262 888 Gene3D - 30 196 - -
Prci1g1262 888 Gene3D - 225 412 - -
Prci1g1262 888 SUPERFAMILY Protein kinase-like (PK-like) 510 810 IPR011009 -
Prci1g1262 888 Pfam Protein tyrosine and serine/threonine kinase 542 805 IPR001245 GO:0004672|GO:0006468
Prci1g1262 888 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Prci1g1262 888 ProSiteProfiles Protein kinase domain profile. 536 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1262 888 FunFam Receptor-like protein kinase FERONIA 613 828 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1262 Prci-Chr1 26227614 26230527 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1262 25 888 Receptor kinase-like Gene Family AT3G51550 45.151 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Prci1g1262 Malectin_like 4.3e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1262 - - pcin:129293555 1294.64