LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1g1260	ATGAACCTGATGATTCGCCCCAGCACTACCACATTCTTCTTTTCATTTTCACTCTTTTGTCTTACCATTCTAGTCGTCGTCGTCGATTCTTACAATCCCGTTGAACTCTTCAGTATCAACTGTGGCTCTAATGGAAATTCTTCCGTAGGAAACAGGACATGGATTGGAGACATTGATTCAAAGCTTTTGTCGTCTTCACAAGACAAATCCAGTGCTGCCACAGCAATCAATCAATCTCCTTCCATCATTCAGGTTCCATACACAACAGCTCGTCTCTCTCGCTCTAAGTTCATCTATTCTTTCCCTGTTACTCCTGGTCAGAAATTCGTTCGCCTTTTCTTCTACCCAACCTCATACCCAGGTTTTGATTCCTTCAATGGCTTATTCACGGTGGAATCCGGTGGGTTTACTCTGCTTAAGGACTTCAACGCTTCCCTCAATGCTCTGACTGAAGGCAGAGACACATTGTTTAGAGAATATTGCGTCAACGTGGATGATGAGTATCGGCTCAACGTGGGTGGAAAAGCAATATCTCCTGATTACGACACAGGAATGCTCAGGTCCTGGGAACCAGATGACAATTTTTCGATGATTGCACATTATTTACCTATTCAATTTCCTGAGGCGAATCTCACCTACACCATGGAACCTGATTACACAGCACCTGTCGATGTCTATGGAACCGCAAGATCTATGGGAAGAAACGCTTGGAACAACATAAGTAACATCACTTGGGAATTCTCTGTTGATTCTGGGTTTACATACGTGGTTAGGCTTCACTTTTGCGAGCTTGACCCAAACATTACGAACCCCAGTGACCGAGCGTTCTTCATCTACATAGCGGGACAGGTAGCTGATGATCGCGCAGATGTTTTGAGATGGGCAAAGCAAAAAGGGGTTCCGGTTCATAGAGACTATGCTGTTTTTATAGTAGGAAATCAGAATAAGGCTAAGCTTTCGGTCCAAATGCATCCTCTCCGAGACAGCCAAACTATCTACAGCGATCCGTCGTTGAACGGACTTGAAATTTTCAAAATCAGCGACCCAAAAAGCAATAATCTCGCCGGACCCAACCCTGACCTTCGCCCTCTTCGTCGGGCGACACCGTTTGTTGAGAAGTCCAAAAGAGGTAGTAGAAATACGAAGACAATAGTCGGTGTCGTTGTCGGCGTGGTTGCCGGAAACGTTTTGCTCTCTTTTATTGCTTTCTTCCTCATCATACAAGGGAAGAGAGTCAAGGATTCAAAATCCAATGTCGCCGCCTCCAAGTGGGGTCCACTTGTGTATATTACATCCAAATCAACCAACACGACTGCCTTATCTGTGCCATCTGATCTCTGCCATTACTTTTCAATCACTGAGATTAGAGCCGCCACCAACAACTTCGACGAACTCTTCATCATTGGGATCGGAGGATTCGGCAACGTTTACAAAGGCTACATCAACGACGGTACCATTCCGGTGGCGATCAAGCGGCTCAAACTGAATTCTCAACAAGGGGCCCACGAGTTCAAAACCGAGATTGAAGTGCTCTCACAGCTTCGCCACCGTCATCTAGTATCTCTCATCGGTTACTGTAACGAAAACAACGAGATGATCCTAGTCTACGATTTCATGGCTAATGGGACCCTCGGTGACCATCTATATAACACCGATAACCCACCTCTTACGTGGAAGCAAAGGCTTCAGATTTGCATAGGAGCAGCAAGGGGATTGCATTATCTCCATGCAGGTGCGATGCACACTATCATTCATCGTGACGTGAAGACTACCAATATCTTATTGGACGAGAAATGGGTCGCCAAGGTTTCCGACTTCGGACTATCCAGGATCGGACCAACGGGCATGTCGAAGGCTCACGTCAGCACGGTGGTGAAGGGCAGTGTCGGGTATTTGGACCCGGAATACTACAAACGTCAACGTTTGACTGAAAAGTCTGACGTGTACTCCTTCGGCGTGGTTCTGTTTGAGATATTATGCGCCAGGCCGGCATTGATCCGTACGGCGGAGAAGAAACAGGTGTCACTTGCTGATTGGGGTAAGCATTGCTACCAAATGGGGTCGCTGGCTCAGATTGTGGACCCAGCTTTGACGGGAAAGATATCGCCGGAGTGCTTGAGGAAGTTCAGCGAGATAGCTGCGAGCTGTCTGCTAGACGACGGGACCCAGAGGCCATCCATGAACGACGTCGTATGGGGGCTGGAGTTTGCGTTGCAGCTACAAGAGAATGCAGAACAACAGACGAGCGAATTAAAGAGGAAGTGA	2265	0.4724	MNLMIRPSTTTFFFSFSLFCLTILVVVVDSYNPVELFSINCGSNGNSSVGNRTWIGDIDSKLLSSSQDKSSAATAINQSPSIIQVPYTTARLSRSKFIYSFPVTPGQKFVRLFFYPTSYPGFDSFNGLFTVESGGFTLLKDFNASLNALTEGRDTLFREYCVNVDDEYRLNVGGKAISPDYDTGMLRSWEPDDNFSMIAHYLPIQFPEANLTYTMEPDYTAPVDVYGTARSMGRNAWNNISNITWEFSVDSGFTYVVRLHFCELDPNITNPSDRAFFIYIAGQVADDRADVLRWAKQKGVPVHRDYAVFIVGNQNKAKLSVQMHPLRDSQTIYSDPSLNGLEIFKISDPKSNNLAGPNPDLRPLRRATPFVEKSKRGSRNTKTIVGVVVGVVAGNVLLSFIAFFLIIQGKRVKDSKSNVAASKWGPLVYITSKSTNTTALSVPSDLCHYFSITEIRAATNNFDELFIIGIGGFGNVYKGYINDGTIPVAIKRLKLNSQQGAHEFKTEIEVLSQLRHRHLVSLIGYCNENNEMILVYDFMANGTLGDHLYNTDNPPLTWKQRLQICIGAARGLHYLHAGAMHTIIHRDVKTTNILLDEKWVAKVSDFGLSRIGPTGMSKAHVSTVVKGSVGYLDPEYYKRQRLTEKSDVYSFGVVLFEILCARPALIRTAEKKQVSLADWGKHCYQMGSLAQIVDPALTGKISPECLRKFSEIAASCLLDDGTQRPSMNDVVWGLEFALQLQENAEQQTSELKRK	754

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1g1260	754	Pfam	Malectin-like domain	168	346	IPR024788	-
	Prci1g1260	754	Pfam	Protein tyrosine and serine/threonine kinase	468	731	IPR001245	GO:0004672\|GO:0006468
	Prci1g1260	754	FunFam	Receptor-like protein kinase FERONIA	539	754	-	-
	Prci1g1260	754	FunFam	FERONIA receptor-like kinase	162	347	-	-
	Prci1g1260	754	Gene3D	Transferase(Phosphotransferase) domain 1	539	754	-	-
	Prci1g1260	754	Pfam	Malectin domain	37	166	IPR021720	-
	Prci1g1260	754	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	583	595	IPR008271	GO:0004672\|GO:0006468
	Prci1g1260	754	Coils	Coil	734	754	-	-
	Prci1g1260	754	FunFam	Receptor-like protein kinase FERONIA	434	538	-	-
	Prci1g1260	754	ProSitePatterns	Protein kinases ATP-binding region signature.	468	491	IPR017441	GO:0005524
	Prci1g1260	754	Gene3D	Phosphorylase Kinase; domain 1	426	538	-	-
	Prci1g1260	754	SMART	serkin_6	462	737	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1g1260	754	Gene3D	-	168	347	-	-
	Prci1g1260	754	Gene3D	-	35	167	-	-
	Prci1g1260	754	CDD	STKc_IRAK	468	731	-	-
	Prci1g1260	754	PANTHER	OS07G0166700 PROTEIN	447	741	IPR045272	GO:0004714\|GO:0006468
	Prci1g1260	754	SUPERFAMILY	Protein kinase-like (PK-like)	430	735	IPR011009	-
	Prci1g1260	754	ProSiteProfiles	Protein kinase domain profile.	462	737	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci1g1260	Prci-Chr1	25985088	25987921	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1g1260	25	746	Receptor kinase-like Gene Family	AT3G51550	50.376	0.0	708

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Prci1g1260		PK_Tyr_Ser-Thr	2.2e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1g1260	-		-	gsj:114381619	818.92