Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1259 ATGAACCTGATGATTCGCCCCAGCACTACCACATTCTTCTTTTCATTTTCACTCTTTTGTCTTACCATTCTAGTCGTCGTCGTCGATTCTTACAATCCCGTTGAACTCTTCAGTATCAACTGTGGCTCTAATGGAAATTCTTCCGTAGGAAACAGGACATGGATTGGAGACATTGATTCAAAGCTTTTGTCGTCTTCACAAGACAAATCCAGTGCTGCCACAGCAATCAATCAATCTCCTTCCATCATTCAGGTTCCATACACAACAGCTCGTCTCTCTCGCTCTAAGTTCATCTATTCTTTCCCTGTTACTCCTGGTCAGAAATTCGTTCGCCTTTTCTTCTACCCAACCTCATACCCAGGTTTTGATTCCTTCAATGGCTTATTCACGGTGGAATCCGGTGGGTTTACTCTGCTTAAGGACTTCAACGCTTCCCTCAATGCTCTGACTGAAGGCAGAGACACATTGTTTAGAGAATATTGCGTCAACGTGGATGATGGTGAGAGTCTCAATTTGACCTTCACGCCAAACTTGACGAACCCAGATTACTATGCTTTCATCAATGGAATCGAGATCGTGTCCATGCCTACTAATCTTTACTACACGGAATCTGATGGTCAAGGGGTTCCATTTGTGGGTCATGATGGAAGCTTTTTCATAATCGGCAATAACTCTGCTTTGGAAACAGAGTATCGGCTCAACGTGGGTGGAAAAGCAATATCTCCTGATTACGACACAGGAATGCTCAGGTCCTGGGAACCAGATGACAATTTTTCGATGATTGCACATTATTTACCTATTCAATTTCCTGAGGCGAATCTCACCTACACCATGGAACCTGATTACACAGCACCTGTCGATGTCTATGGAACCGCAAGATCTATGGGAAGAAACGCTTGGAACAACATAAGTAACATCACTTGGGAATTCTCTGTTGATTCTGGGTTTACATACGTGGTTAGGCTTCACTTTTGCGAGCTTGACCCAAACATTACGAACCCCAGTGACCGAGCGTTCTTCATCTACATAGCGGGACAGGTAGCTGATGATCGCGCAGATGTTTTGAGATGGGCAAAGCAAAAAGGGGTTCCGGTTCATAGAGACTATGCTGTTTTTATAGTAGGAAATCAGAATAAGGCTAAGCTTTCGGTCCAAATGCATCCTCTCCGAGACAGCCAAACTATCTACAGCGATCCGTCGTTGAACGGACTTGAAATTTTCAAAATCAGCGACCCAAAAAGCAATAATCTCGCCGGACCCAACCCTGACCTTCGCCCTCTTCGTCGGGCGACACCGTTTGTTGAGAAGTCCAAAAGAGGTAGTAGAAATACGAAGACAATAGTCGGTGTCGTTGTCGGCGTGGTTGCCGGAAACGTTTTGCTCTCTTTTATTGCTTTCTTCCTCATCATACAAGGGAAGAGAGTCAAGGATTCAAAATCCAATGTCGCCGCCTCCAAGTGGGGTCCACTTGTGTATATTACATCCAAATCAACCAACACGACTGCCTTATCTGTGCCATCTGATCTCTGCCATTACTTTTCAATCACTGAGATTAGAGCCGCCACCAACAACTTCGACGAACTCTTCATCATTGGGATCGGAGGATTCGGCAACGTTTACAAAGGCTACATCAACGACGGTACCATTCCGGTGGCGATCAAGCGGCTCAAACTGAATTCTCAACAAGGGGCCCACGAGTTCAAAACCGAGATTGAAGTGCTCTCACAGCTTCGCCACCGTCATCTAGTATCTCTCATCGGTTACTGTAACGAAAACAACGAGATGATCCTAGTCTACGATTTCATGGCTAATGGGACCCTCGGTGACCATCTATATAACACCGATAACCCACCTCTTACGTGGAAGCAAAGGCTTCAGATTTGCATAGGAGCAGCAAGGGGATTGCATTATCTCCATGCAGGTGCGATGCACACTATCATTCATCGTGACGTGAAGACTACCAATATCTTATTGGACGAGAAATGGGTCGCCAAGGTTTCCGACTTCGGACTATCCAGGATCGGACCAACGGGCATGTCGAAGGCTCACGTCAGCACGGTGGTGAAGGGCAGTGTCGGGTATTTGGACCCGGAATACTACAAACGTCAACGTTTGACTGAAAAGTCTGACGTGTACTCCTTCGGCGTGGTTCTGTTTGAGATATTATGCGCCAGGCCGGCATTGATCCGTACGGCGGAGAAGAAACAGGTGTCACTTGCTGATTGGGGTAAGCATTGCTACCAAATGGGGTCGCTGGCTCAGATTGTGGACCCAGCTTTGACGGGAAAGATATCGCCGGAGTGCTTGAGGAAGTTCAGCGAGATAGCTGCGAGCTGTCTGCTAGACGACGGGACCCAGAGGCCATCCATGAACGACGTCGTATGGGGGCTGGAGTTTGCGTTGCAGCTACAAGAGAATGCAGAACAACAGACGAGCGAATTAAAGAGGAAGTGA 2454 0.469 MNLMIRPSTTTFFFSFSLFCLTILVVVVDSYNPVELFSINCGSNGNSSVGNRTWIGDIDSKLLSSSQDKSSAATAINQSPSIIQVPYTTARLSRSKFIYSFPVTPGQKFVRLFFYPTSYPGFDSFNGLFTVESGGFTLLKDFNASLNALTEGRDTLFREYCVNVDDGESLNLTFTPNLTNPDYYAFINGIEIVSMPTNLYYTESDGQGVPFVGHDGSFFIIGNNSALETEYRLNVGGKAISPDYDTGMLRSWEPDDNFSMIAHYLPIQFPEANLTYTMEPDYTAPVDVYGTARSMGRNAWNNISNITWEFSVDSGFTYVVRLHFCELDPNITNPSDRAFFIYIAGQVADDRADVLRWAKQKGVPVHRDYAVFIVGNQNKAKLSVQMHPLRDSQTIYSDPSLNGLEIFKISDPKSNNLAGPNPDLRPLRRATPFVEKSKRGSRNTKTIVGVVVGVVAGNVLLSFIAFFLIIQGKRVKDSKSNVAASKWGPLVYITSKSTNTTALSVPSDLCHYFSITEIRAATNNFDELFIIGIGGFGNVYKGYINDGTIPVAIKRLKLNSQQGAHEFKTEIEVLSQLRHRHLVSLIGYCNENNEMILVYDFMANGTLGDHLYNTDNPPLTWKQRLQICIGAARGLHYLHAGAMHTIIHRDVKTTNILLDEKWVAKVSDFGLSRIGPTGMSKAHVSTVVKGSVGYLDPEYYKRQRLTEKSDVYSFGVVLFEILCARPALIRTAEKKQVSLADWGKHCYQMGSLAQIVDPALTGKISPECLRKFSEIAASCLLDDGTQRPSMNDVVWGLEFALQLQENAEQQTSELKRK 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1259 817 Gene3D Phosphorylase Kinase; domain 1 489 601 - -
Prci1g1259 817 CDD STKc_IRAK 531 794 - -
Prci1g1259 817 SMART serkin_6 525 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1259 817 Pfam Malectin-like domain 39 409 IPR024788 -
Prci1g1259 817 ProSiteProfiles Protein kinase domain profile. 525 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1259 817 FunFam Receptor-like protein kinase FERONIA 602 817 - -
Prci1g1259 817 FunFam Receptor-like protein kinase FERONIA 497 601 - -
Prci1g1259 817 FunFam FERONIA receptor-like kinase 225 410 - -
Prci1g1259 817 ProSitePatterns Protein kinases ATP-binding region signature. 531 554 IPR017441 GO:0005524
Prci1g1259 817 PANTHER OS03G0124300 PROTEIN-RELATED 12 479 IPR046957 GO:0004672
Prci1g1259 817 FunFam FERONIA receptor-like kinase 36 196 - -
Prci1g1259 817 SUPERFAMILY Protein kinase-like (PK-like) 493 798 IPR011009 -
Prci1g1259 817 Coils Coil 797 817 - -
Prci1g1259 817 Pfam Protein tyrosine and serine/threonine kinase 531 794 IPR001245 GO:0004672|GO:0006468
Prci1g1259 817 Gene3D - 226 410 - -
Prci1g1259 817 Gene3D - 35 196 - -
Prci1g1259 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Prci1g1259 817 Gene3D Transferase(Phosphotransferase) domain 1 602 817 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1259 Prci-Chr1 25985086 25987921 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1259 25 809 Receptor kinase-like Gene Family AT3G51550 53.798 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Prci1g1259 Malectin_like 1.9e-40 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1259 - - gsj:114381619 948.347