LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1g1258	ATGACGATACAATCTTCAATCGCCGTTTCCTTCCTCTTATGCATCTTCTTCCAAGTCCTTTTATCTACAGGCGTCACCGCCTACAGTCCTGTCGATGACTTCGCCGTCACTTGCGGTTCCTCTGGCAAGTATTCTGATACAATAAATAATCGGACTTGGACCGGAGACATAAGCTCTCAGTTATTCTCTCTCACTGAAACCCTCAACAACAACCACTCCCTCACCGCCGACTCAACAGACAGCCAGAAACTCCCCTATCGCACTGTTCGCCTCTCTCGCTCAGAATTTTCCTACTCATTTCCGGTGACCGCTGGCCAGAAGTTTGTTCGCCTCCACTTTTACCCATCTTCTTACCTCGACTTCCATCGTTCCGACTCTCTCTTCACCGTCCAAGCCGCAAACTACACCCTTCTTAAGGACTTCAACGCTTCACTTAACGCCGATTATGCCGCCGTCGAAACCATTGTACGGGAATACTGCATCAACGTCGACCCAGGACAGAGGCTAAACGTGACGTTCACGCCCAACTCATCTCATCCGAATGCCTATGCTTTCGTCAACGGGATCGAGGTTGTCTCGATGCCGACCTATCTTTATTACACCAAACCTGACGACCTACAAACGATGAAGCTAGATGACAGCACCAAGCAGTTTCCGATCGAAAACAGCAGTGCTCTTGAGACTGTGTACAGAATCAACGTTGGCGGAAGCCAGATACCAACCGAACAAGACACCGGCATGTTCCGGCGTTGGTACGACGATGTTCAGTACTTGGAGATACTGCGTTCACATAGTGTGTCAGCAGGCTTTGGTTTAAAGCCAATCTACAAGGATGATCAAAATTATTTTGCACCTGATGATGTATATATGACTGCTCGAAACTACGGCATGAACCAAACGTCGGAATACAATGTTACATGGCATTTCGAGGTCGACTCAGAGTTCATTTATATGGTGAGATTGCATTTTTGTGAGTTTGATGACAAGATTGAAAGTCTTGGAGGGAGAGTTTTTCAGATCTTTATAGCTGATAAGTTGGTGGAGCGTGTTGCTGATGTGTTCCAGTGGAGTGGGAGCCTGAAGGTTCCTGTACATAAGGACTACGCGGTGTCGATGTGGAACATAGGAATCTCGAAGAAGCTGAATCTTTCAATCAAGTTGCAGCCAAACCCGACAGCAAGGAGCATTTACAGAGATGTCTTACTGAACGGTATTGAAATTCTGAAAATAAGTGATCCAGCCAGTGGCAATCTTGGAGGTCCCAATCCTGATCCACGTCCGTCTCCCTCAATACCAAACATACCATCACCCACCAAATCATCAAATAAAACAAGTGTAATTCCCATTATCGTTGGGGTAGCGTCAGGCATCGTTGTGCTATCTCTTATTGTTTTGTTGATTATCTGGCGACTGAAGACTAGAGTTCTGGTCAACGAAAGTAATTCGTTGTGGGGACAGAGATCAGTACAATCGTCCGAAACAAACAAATCACAAGGGTCATCGTTGCCGTCCGATTTATGTCGCTGCTTTTCAATAGTTGAGATAAGAGCAGCAACCAATAACTTCGATGATATTTTCATAGTGGGCGTCGGAGGGTTTGGTAATGTCTATAAAGGCTACATTGATAATGGTACAGTTCCTGTGGCAATCAAACGGCTCAAGCAAGGTTCACAACAAGGGCTCCGTGAGTTCCAAACTGAGATTGAAATGCTCTCTCAGCTTCGTCACAATCATTTAGTGTCTCTCATTGGTTACTGCAATGATGGCAACGAGATGATCCTCGTCTACGAGTTCATGGCTCGCGGGACCCTCCGTGACCATCTTTACAATTCTGACAATCATCCACTTTCCTGGAAACAAAGGTTGGAGATGTGCCTTGGTGCGGCGCGTGGACTGCATTACCTTCATACTGGTGCAAACCACACTGTCATTCATCGTGATGTGAAGACCACAAATATCTTGATAGATGAGAAATGGGTGGCTAAGGTTTCGGATTTTGGATTATCCAAAATAGGACCCACAGGAATGTCCAAGTCTCACATTAGCACAGTGGTAAAAGGAAGTGTTGGTTACTTGGATCCAGAATACTATAAGCGTCAAAGGTTAACTGAGAAATCTGACGTTTACTCCTTTGGAGTTGTACTGCTCGAAGTACTTTGTGGGAGGCCTCCTTTGCTACGTAACGTGGAGAAGAAGAAAACAAGTCTAGTGGTGTGGGTTCGAAAATGCCATCGTGACGATGTGATTCATCAAACTGTTGACCCTTTCCTGACAGAACGTATCAAATCAGAGTCCTTAAAAGCATTCAGTGACTTGGCACTAAAATGTTTGGTCGATAATGGGAATGAACGACCTTCGATGAACGACGTCGTGTGGGGCCTAGAGTTTGCGTTGCAGCTACAAGAATGCACAGAGGAATTAGTGGGGCTTGAAGGAAAAGGCGAGGAAAGGGCTCTGTTGGGAAAAGTGGCAAACGTGAAAGACAGTTTAGTAGTTTTCACGAGCAGTGATGAATCAAAAGGCAGCAGGTTGACTACTTCAAGCAGTGAAAATCAGTCTTTAATTTCTAAGTCAATCTTCTCCGAGTTGGTTCACCCGACGGGTCGATGA	2610	0.4563	MTIQSSIAVSFLLCIFFQVLLSTGVTAYSPVDDFAVTCGSSGKYSDTINNRTWTGDISSQLFSLTETLNNNHSLTADSTDSQKLPYRTVRLSRSEFSYSFPVTAGQKFVRLHFYPSSYLDFHRSDSLFTVQAANYTLLKDFNASLNADYAAVETIVREYCINVDPGQRLNVTFTPNSSHPNAYAFVNGIEVVSMPTYLYYTKPDDLQTMKLDDSTKQFPIENSSALETVYRINVGGSQIPTEQDTGMFRRWYDDVQYLEILRSHSVSAGFGLKPIYKDDQNYFAPDDVYMTARNYGMNQTSEYNVTWHFEVDSEFIYMVRLHFCEFDDKIESLGGRVFQIFIADKLVERVADVFQWSGSLKVPVHKDYAVSMWNIGISKKLNLSIKLQPNPTARSIYRDVLLNGIEILKISDPASGNLGGPNPDPRPSPSIPNIPSPTKSSNKTSVIPIIVGVASGIVVLSLIVLLIIWRLKTRVLVNESNSLWGQRSVQSSETNKSQGSSLPSDLCRCFSIVEIRAATNNFDDIFIVGVGGFGNVYKGYIDNGTVPVAIKRLKQGSQQGLREFQTEIEMLSQLRHNHLVSLIGYCNDGNEMILVYEFMARGTLRDHLYNSDNHPLSWKQRLEMCLGAARGLHYLHTGANHTVIHRDVKTTNILIDEKWVAKVSDFGLSKIGPTGMSKSHISTVVKGSVGYLDPEYYKRQRLTEKSDVYSFGVVLLEVLCGRPPLLRNVEKKKTSLVVWVRKCHRDDVIHQTVDPFLTERIKSESLKAFSDLALKCLVDNGNERPSMNDVVWGLEFALQLQECTEELVGLEGKGEERALLGKVANVKDSLVVFTSSDESKGSRLTTSSSENQSLISKSIFSELVHPTGR	869

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1g1258	869	Gene3D	Phosphorylase Kinase; domain 1	482	598	-	-
	Prci1g1258	869	PANTHER	OS03G0124300 PROTEIN-RELATED	9	481	IPR046957	GO:0004672
	Prci1g1258	869	ProSiteProfiles	Protein kinase domain profile.	522	797	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1g1258	869	ProSitePatterns	Protein kinases ATP-binding region signature.	528	551	IPR017441	GO:0005524
	Prci1g1258	869	MobiDBLite	consensus disorder prediction	416	442	-	-
	Prci1g1258	869	FunFam	Receptor-like protein kinase FERONIA	599	815	-	-
	Prci1g1258	869	FunFam	FERONIA receptor-like kinase	224	411	-	-
	Prci1g1258	869	SUPERFAMILY	Protein kinase-like (PK-like)	496	796	IPR011009	-
	Prci1g1258	869	Gene3D	-	224	411	-	-
	Prci1g1258	869	Gene3D	-	34	195	-	-
	Prci1g1258	869	Pfam	Malectin-like domain	37	409	IPR024788	-
	Prci1g1258	869	SMART	serkin_6	522	797	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci1g1258	869	Gene3D	Transferase(Phosphotransferase) domain 1	599	808	-	-
	Prci1g1258	869	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	643	655	IPR008271	GO:0004672\|GO:0006468
	Prci1g1258	869	FunFam	Receptor-like protein kinase FERONIA	494	598	-	-
	Prci1g1258	869	Pfam	Protein tyrosine and serine/threonine kinase	528	791	IPR001245	GO:0004672\|GO:0006468
	Prci1g1258	869	MobiDBLite	consensus disorder prediction	420	434	-	-
	Prci1g1258	869	CDD	STKc_IRAK	528	791	-	-
	Prci1g1258	869	FunFam	FERONIA receptor-like kinase	33	195	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci1g1258	Prci-Chr1	25935549	25938403	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1g1258	28	869	Receptor kinase-like Gene Family	AT3G51550	46.749	0.0	732

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Prci1g1258		Malectin_like	3.7e-40	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1g1258	-		-	pcin:129293555	1145.18