Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1253 ATGACCCTGATTCGCCGTACCATCACCGCATTCTTCCTTTCTTTGTCCCTGTTTTGCCTTTCCATTCTCGTCGTCGTCGATTCTTACGATCCCGTTGACATCTTCAGCATCAACTGTGGTTCTCGTGGAAATTCTTCCCTAGGAAACAGGACATGGATTGGAGACATCGATTCAAAGCTCTTGTCTTCTTCACAAGACAAATCCAGTCCTGCTACTGCAATCAATCAATCTCCCTCCACCATTCAGGTTCCGTACACCACAGCTCGTCTCTCTCGTTCTAAGTTCACCTATTCTTTTCCTGTTACTCCAGGTCAGAAGTTCGTTCGCCTTTTCTTCTACCCAACCTCGTACCCAGGTTTTGATTCCTCTAATGGCTTCTTCACGGTGGAATCCGGTGGGTTTACTCTGCTTAAGGACTTCAACGCTTCTCTCAATGCTCTGGCTGAAGGTAGTGACACCTTGCTCAGAGAATATTGCGTCAACGTCGATGATGCTGGGAGGCTCAACTTGACCTTTTCTCCTAACTCGACGAACCCAGATTACTATGCTTTCATCAATGGAATCGAGATCGTCTCCATGCCTACTGACCTTTACTACACAGAATCCGACGGTCAAGGGGTTCCATTTGTGGGTCGTAGTGGAAGCTTTTTCACTATCGGAAATAACTCTGCTTTGGAAAAAGAGTATCGGCTTAACGTTGGTGGAAAAGCAATATCTTCTGATTACGACACGGGGATGCTCAGGTCTTGGGAACCAGATGATTCTTTTGTGAAGTCTCCGAGTTACTTACCTGTTCAAATTCTACCTGTGAATCTTACTTACAGCATAGAACCTGATTATACAGCACCTGTTGATGTCTATTTAACAGCAAGAGATATGGGAAAAAACGCTACTTGGAACAAGTTGAATAACCTTACTTGGGAATTCTCTGTAGATTCTGGGTTTACCTACATGGTTAGGCTTCACTTTTGCGAGCTTGACCCAAACATTACATCTTCTAGTGACAGAGCGTTCTTCATCTACATAGCTGGACAGGTTGCTGAGGATAACGCAGATATTCTGAAATGGGGAAAGCAAAAAGGGGTTCCGGTTCACAGAGATTATGTTGTTTCTGTAAGAGGAAATCAGAAGAAGGAGAAGCTTTTGCTCCAAATGCATCCTCTCCCAGATAGCAAAACTGTTTACAGCGATCCGATCTTGAACGGACTTGAGATTTTTAAAATCAGCGACCCAGCAAGCAATAATCTCGCCGGACCCAATCCTGACCTTCCACCTCTTCCTCTGACGCCACCGACGTCAGTTCAGAAATCCAAAAAAAGTAGCAGTAATACAACGACAATAGTCGGCGTCGTTGTTGGTGTGGTTGCCGGCATCATTTTACTCTTCATTATTGGTGCTTTCTTCCTCATCAGACGGGGGAAGAGGATCAAGGATTCAAAGTCCAGTGATGCAGGCTCCAAGTGGGGTCCACTGTCGCATTCCACGGCGAAATCCACCACCACGACTGCCTCCACTCTGCCGTCCGATCTCTGCCGTTACTTTTCAATCGCTGAGATCAGAGCCGCCACCAACAACTTCGACGAAGTCTTTATCATCGGCATCGGAGGATTCGGCAACGTGTACAAAGGCTACATCGACGACAGCACCATCCCGGTGGCGATCAAGCGGCTTAAACCGGATTCACAACAAGGGGCCCACGAGTTCAAAACCGAGATTGAAATGCTCTCACAGCTTCGTCACCTTCATCTAGTTTCTCTTATAGGTTACTGCAACGAAAACAACGAGATGATCCTGGTCTACGATTTCATGGCTCGTGGGACCCTCCGTGACCATCTGTATAACTCCGAAAACCCACCTCTTACATGGAAGCAAAGGCTTCAGATTTGTATCGGAGCAGCAAAGGGATTGCATTATCTTCATTCAGGTGCGAGATATACTATCATTCACCGCGACGTGAAGTCGACGAATATCTTACTCGACGAGAAATGGGTTGCCAAGGTTTCCGACTTCGGACTATCCAGAATCGGACCGACGGGCATGTCGAAGGCTCACGTCAGCACAGTGGTGAAGGGCAGTATGGGGTATTTAGACCCAGAATACTACAAACGCCAACGTTTGACTGAGAAGTCCGACGTGTACTCCTTCGGCGTGGTGCTGTTCGAGATATTATGCGCCAGGCCGGCGCTGATACGTACGACGGAAAAGAAACAGGTGTCACTTGCTGATTGGGGCAAGCATTGCTACCAAATGGGGTCGCTGGATCAAATTGTGGACCCAGATTTGATAGGAAAGATATCGCCAGAGTGTTTGAGGAAGTTCGGCGAGATAGCTGCTAGCTGTCTACTGGACGATGGGACCCAGCGGCCATCCATGAACGACGTCGTTTGGGGATTGGAGTTTGCATTGCAGCTGCAGGAGAACGCAGAACAACAGACAAACGAAAGTGAAAGAGAAGAGGTTGGTGGAGGAGGTAAAAGCTCTGAGGGTAGCCATGACGATTTGTTCAGTAGCAGTAGCGGAATGAGTGTAGGGGCATTTCCGGAATTTAACAAGGGTTTTAGTGGAGTGAGCATGATGACAAGTAGCGGAGGCCGTAGTTATGGGACGAAGGAAACAGATTCGTTGATGACAGTGAATATTTTTTCAGAGATCGGAGATCCAAAAGCACGATGA 2673 0.4729 MTLIRRTITAFFLSLSLFCLSILVVVDSYDPVDIFSINCGSRGNSSLGNRTWIGDIDSKLLSSSQDKSSPATAINQSPSTIQVPYTTARLSRSKFTYSFPVTPGQKFVRLFFYPTSYPGFDSSNGFFTVESGGFTLLKDFNASLNALAEGSDTLLREYCVNVDDAGRLNLTFSPNSTNPDYYAFINGIEIVSMPTDLYYTESDGQGVPFVGRSGSFFTIGNNSALEKEYRLNVGGKAISSDYDTGMLRSWEPDDSFVKSPSYLPVQILPVNLTYSIEPDYTAPVDVYLTARDMGKNATWNKLNNLTWEFSVDSGFTYMVRLHFCELDPNITSSSDRAFFIYIAGQVAEDNADILKWGKQKGVPVHRDYVVSVRGNQKKEKLLLQMHPLPDSKTVYSDPILNGLEIFKISDPASNNLAGPNPDLPPLPLTPPTSVQKSKKSSSNTTTIVGVVVGVVAGIILLFIIGAFFLIRRGKRIKDSKSSDAGSKWGPLSHSTAKSTTTTASTLPSDLCRYFSIAEIRAATNNFDEVFIIGIGGFGNVYKGYIDDSTIPVAIKRLKPDSQQGAHEFKTEIEMLSQLRHLHLVSLIGYCNENNEMILVYDFMARGTLRDHLYNSENPPLTWKQRLQICIGAAKGLHYLHSGARYTIIHRDVKSTNILLDEKWVAKVSDFGLSRIGPTGMSKAHVSTVVKGSMGYLDPEYYKRQRLTEKSDVYSFGVVLFEILCARPALIRTTEKKQVSLADWGKHCYQMGSLDQIVDPDLIGKISPECLRKFGEIAASCLLDDGTQRPSMNDVVWGLEFALQLQENAEQQTNESEREEVGGGGKSSEGSHDDLFSSSSGMSVGAFPEFNKGFSGVSMMTSSGGRSYGTKETDSLMTVNIFSEIGDPKAR 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1253 890 FunFam Receptor-like protein kinase FERONIA 498 602 - -
Prci1g1253 890 Gene3D Transferase(Phosphotransferase) domain 1 603 824 - -
Prci1g1253 890 MobiDBLite consensus disorder prediction 807 837 - -
Prci1g1253 890 Gene3D Phosphorylase Kinase; domain 1 489 602 - -
Prci1g1253 890 Gene3D - 226 409 - -
Prci1g1253 890 Gene3D - 33 195 - -
Prci1g1253 890 Coils Coil 798 818 - -
Prci1g1253 890 Pfam Malectin-like domain 37 408 IPR024788 -
Prci1g1253 890 FunFam Receptor-like protein kinase FERONIA 603 820 - -
Prci1g1253 890 MobiDBLite consensus disorder prediction 479 503 - -
Prci1g1253 890 PANTHER OS03G0124300 PROTEIN-RELATED 11 477 IPR046957 GO:0004672
Prci1g1253 890 MobiDBLite consensus disorder prediction 416 440 - -
Prci1g1253 890 ProSiteProfiles Protein kinase domain profile. 526 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1253 890 FunFam FERONIA receptor-like kinase 34 194 - -
Prci1g1253 890 Pfam Protein tyrosine and serine/threonine kinase 532 795 IPR001245 GO:0004672|GO:0006468
Prci1g1253 890 CDD STKc_IRAK 532 795 - -
Prci1g1253 890 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Prci1g1253 890 FunFam FERONIA receptor-like kinase 223 409 - -
Prci1g1253 890 ProSitePatterns Protein kinases ATP-binding region signature. 532 555 IPR017441 GO:0005524
Prci1g1253 890 MobiDBLite consensus disorder prediction 811 826 - -
Prci1g1253 890 SUPERFAMILY Protein kinase-like (PK-like) 510 796 IPR011009 -
Prci1g1253 890 MobiDBLite consensus disorder prediction 485 503 - -
Prci1g1253 890 SMART serkin_6 526 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1253 Prci-Chr1 25614884 25618049 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1253 21 890 Receptor kinase-like Gene Family AT3G51550 52.856 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Prci1g1253 Malectin_like 8.6e-43 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1253 - - gsj:114381619 957.592