Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1246 ATGGTTGCATCCGATTCGAGACCCAATTCTTTTGGCCAGACCGAGATTAACTGGGATAAGCTTGACAAAACTAAGTTTTATGTTGTTGGAGCTGGAATCTTTACAGGCATTACAGTGGTCCTCTACCCAGTTTCTGTTGTGAAAACAAGACTGCAGGTTGCTTCAAAGGATTCTATAGAGAGAAATGCATTTTCTGTTTTAAAAGGATTGCTTAAATCAGATGGCTTTCCTGGTCTTTATAGAGGCTTTGGCACAGTCATAACTGGTTCAATTCCTGGAAGAATCATATTTTTGACTCTGCTAGAGACCACAAAGGTGGCTGCCTTAAGAGTTCTTGAACCGTTTAGACTGACTGAAACCACACAAGCAGCCTTAGCAAATGGAGTTGCAGGCATGACATCATCACTTATGTCTCAAGCAGTGTTTGTTCCTATTGATGTGGTTAGTCAAAAGATGATGGTACAAGGATACTCAGGCCATGCTCAGTACAGTGGAGGTTTGGATGTTGCGCGCAAGGTTTTAAGATCTGAAGGAATTAGGGGATTGTATAGAGGGTTTGGTCTTTCTGTTTTGACTTATTCACCATCGAGCGCTGTATGGTGGGCAAGTTATGGTTCAAGCCAACGGTTCATTTGGAGATTGATTGGACATGGAACTGAATACGAGGAAGGCACTCCTAGACTTCAGAAATTGATGTTAGTTCAGGGTGCTGGTGGGATTATTGCTGCTGCAACTGCATCCTGCATTACAACCCCATTGGATACTATTAAGACACGATTACAGGTGATGGGACATGAAAAGAGAAGCGGTATGAAAAAAGTTGTTAAAGATTTAATCATTGAGGATGGCTGGAAAGGTTTATATAGAGGATTAGGTCCAAGATTTTTCAGCACGTCAGCATGGGGTACTTCAATGATCTTGGCTTATGAATATCTGAAGTTGTCCGGCAGTGCCCATAGACTCAAGTAG 969 0.4211 MVASDSRPNSFGQTEINWDKLDKTKFYVVGAGIFTGITVVLYPVSVVKTRLQVASKDSIERNAFSVLKGLLKSDGFPGLYRGFGTVITGSIPGRIIFLTLLETTKVAALRVLEPFRLTETTQAALANGVAGMTSSLMSQAVFVPIDVVSQKMMVQGYSGHAQYSGGLDVARKVLRSEGIRGLYRGFGLSVLTYSPSSAVWWASYGSSQRFIWRLIGHGTEYEEGTPRLQKLMLVQGAGGIIAAATASCITTPLDTIKTRLQVMGHEKRSGMKKVVKDLIIEDGWKGLYRGLGPRFFSTSAWGTSMILAYEYLKLSGSAHRLK 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1246 322 PRINTS Mitochondrial carrier protein signature 39 53 IPR002067 GO:0055085
Prci1g1246 322 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
Prci1g1246 322 PRINTS Mitochondrial carrier protein signature 239 261 IPR002067 GO:0055085
Prci1g1246 322 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 8 314 - -
Prci1g1246 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 315 IPR018108 -
Prci1g1246 322 Pfam Mitochondrial carrier protein 31 106 IPR018108 -
Prci1g1246 322 Pfam Mitochondrial carrier protein 124 211 IPR018108 -
Prci1g1246 322 Pfam Mitochondrial carrier protein 235 313 IPR018108 -
Prci1g1246 322 SUPERFAMILY Mitochondrial carrier 19 312 IPR023395 -
Prci1g1246 322 Gene3D Mitochondrial carrier domain 37 319 IPR023395 -
Prci1g1246 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Prci1g1246 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 23 107 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1246 Prci-Chr1 25393713 25400679 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1246 16 313 Chloroplast and Mitochondria Gene Families AT5G15640 72.667 3.50e-161 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1246 K15121 - qsa:O6P43_009187 512.686