Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1245 ATGGTTGCATCCGATTCGAGACCCAATTCTTTTGGCCAGACCGAGATTAACTGGGATAAGCTTGACAAAACTAAGTTTTATGTTGTTGGAGCTGGAATCTTTACAGGCATTACAGTGGTCCTCTACCCAGTTTCTGTTGTGAAAACAAGACTGCAGGTTGCTTCAAAGGATTCTATAGAGAGAAATGCATTTTCTGTTTTAAAAGGATTGCTTAAATCAGATGGCTTTCCTGGTCTTTATAGAGGCTTTGGCACAGTCATAACTGGTTCAATTCCTGGAAGAATCATATTTTTGACTCTGCTAGAGACCACAAAGGTGGCTGCCTTAAGAGTTCTTGAACCGTTTAGACTGACTGAAACCACACAAGCAGCCTTAGCAAATGGAGTTGCAGGCATGACATCATCACTTATGTCTCAAGCAGTGTTTGTTCCTATTGATGTGGTTAGTCAAAAGATGATGGTACAAGGATACTCAGGCCATGCTCAGTACAGTGGAGGTTTGGATGTTGCGCGCAAGGTTTTAAGATCTGAAGGAATTAGGGGATTGTATAGAGGGTTTGGTCTTTCTGTTTTGACTTATTCACCATCGAGCGCTGTATGGTGGGCAAGTTATGGTTCAAGCCAACGGTTCATTTGGAGATTGATTGGACATGGAACTGAATACGAGGAAGGCACTCCTAGACTTCAGAAATTGATGTTAGTTCAGGGTGCTGGTGGGATTATTGCTGCTGCAACTGCATCCTGCATTACAACCCCATTGGATACTATTAAGACACGATTACAGGTGATGGGACATGAAAAGAGAAGCGGTATGAAAAAAGTTGTTAAAGATTTAATCATTGAGGATGGCTGGAAAGGTTTATATAGAGGATTAGGTCCAAGATTTTTCAGCACGTCAGCATGGGGTACTTCAATGATCTTGGCTTATGAATATCTGATTGTTTCAGGTTTATTTCCCATATGGCAAGTACTTCAGCAAAAGAAGTATTTTGTTATCTTCATGTTGATAGACATTTTGTAA 1020 0.4078 MVASDSRPNSFGQTEINWDKLDKTKFYVVGAGIFTGITVVLYPVSVVKTRLQVASKDSIERNAFSVLKGLLKSDGFPGLYRGFGTVITGSIPGRIIFLTLLETTKVAALRVLEPFRLTETTQAALANGVAGMTSSLMSQAVFVPIDVVSQKMMVQGYSGHAQYSGGLDVARKVLRSEGIRGLYRGFGLSVLTYSPSSAVWWASYGSSQRFIWRLIGHGTEYEEGTPRLQKLMLVQGAGGIIAAATASCITTPLDTIKTRLQVMGHEKRSGMKKVVKDLIIEDGWKGLYRGLGPRFFSTSAWGTSMILAYEYLIVSGLFPIWQVLQQKKYFVIFMLIDIL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1245 339 Pfam Mitochondrial carrier protein 124 211 IPR018108 -
Prci1g1245 339 Pfam Mitochondrial carrier protein 235 312 IPR018108 -
Prci1g1245 339 Pfam Mitochondrial carrier protein 31 106 IPR018108 -
Prci1g1245 339 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 315 IPR018108 -
Prci1g1245 339 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 8 312 - -
Prci1g1245 339 SUPERFAMILY Mitochondrial carrier 19 312 IPR023395 -
Prci1g1245 339 Gene3D Mitochondrial carrier domain 27 316 IPR023395 -
Prci1g1245 339 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Prci1g1245 339 ProSiteProfiles Solute carrier (Solcar) repeat profile. 23 107 IPR018108 -
Prci1g1245 339 PRINTS Mitochondrial carrier protein signature 39 53 IPR002067 GO:0055085
Prci1g1245 339 PRINTS Mitochondrial carrier protein signature 239 261 IPR002067 GO:0055085
Prci1g1245 339 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1245 Prci-Chr1 25393712 25402394 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1245 16 312 Chloroplast and Mitochondria Gene Families AT5G15640 72.575 6.21e-160 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1245 K15121 - qsa:O6P43_009187 510.76