Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1244 ATGAGGCTTCTTGTAATTCTCCCAGTTCTGTCTCTTCTTGTTCTCTTCTTCTCTTACCATGCAGGGGCTTATGATCCTTTGGATCCAAATGGAAATATAACGATCAAATGGGATGTCATGTCTTGGACCCCTGATGGGTATGTGGCAACGGTGACAATGCACAACTTCCAAATGTACCGTCACATAATGAACCCAGGCTGGACGTTAGCGTGGTCATGGGCGAAGAAGGAAGTGATTTGGTCCATGGTGGGGGCTCAGACGACAGAGCAAGGAGACTGTTCCAAGTTCAAAGGAAACGTCCCTCATTGCTGCAAGAAGACCCCCACAGTGGTGGACCTGCTTCCTGGGGTACCCTACAACCAGCAATTCACTAACTGCTGTAAAGGTGGGGTCGTCCCAGCGTGGGGCCAGGACCCTGCTGGGGCCCTCTCTTCTTTCCAGATCAGCGTTGGACAGGCTGGCACCTCTAATAAGACTGTCAAGCTTCCTAAGAACTTCACTCTCCTTGCTCCTGGTCCTGGTTACACTTGTGGCCCTGCTAAGGTTGTTCCTTCCACTGTGTTTCTTACTCCTGACAAGCGTCGCAAGACCCAAGCACTCATGACATGGAATGTAACCTGCACTTACTCACAATTCCTGGCGAGAAAGAACCCCAGTTGTTGTGTGTCTTTGTCATCATTTTACAACGAAACGATCACGCCATGTACAGCCTGTGCTTGTGGCTGTCAGAACAAGAAGAACTGTGTCAAGAGTGACTCCAAGTTTCGAAACGATAAAGGGGTTCACACTCAAAAGAAAGACAATGACCAGTTGTTACAGTGCACTCATCACATGTGCCCTATCAGAGTACATTGGCACGTGAAGCTAAACTATAAAGACTATTGGCGAGTCAAGATCGCCATAACAAATTTCAATTACAAGATGAATTATTCACTTTGGACTCTCGCTGTGCAGCATCCAAATCTCAACAATGTCACACAGGTCTTCAGCTTCGATTACAAGCCCCTCGTTCCCTACAAGTCTGTCAATGATACAGCTATGTTCTATGGCATGAAGTATTATAATGATCTGTTAATGGAAGCTGGGCCATCCGGGAATGTTCAATCTGAAGTGCTCATGAGGAAAAACAAGAAAACTTTCACCCTCAAGCAGGGTTGGGCATTCCCTCACAAGGTTTACTTCAATGGTGATGAGTGCATGTTGCCACCACCTGATACTTACCCGTTTCTTCCTAATTCTGCTAATTCTCTCAAAAACCTCCTCACCTTCTCACTGTTCATCTTGTCATTCTTGTTCTTCTTATTTGTCTGA 1311 0.4638 MRLLVILPVLSLLVLFFSYHAGAYDPLDPNGNITIKWDVMSWTPDGYVATVTMHNFQMYRHIMNPGWTLAWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFTNCCKGGVVPAWGQDPAGALSSFQISVGQAGTSNKTVKLPKNFTLLAPGPGYTCGPAKVVPSTVFLTPDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCTACACGCQNKKNCVKSDSKFRNDKGVHTQKKDNDQLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAITNFNYKMNYSLWTLAVQHPNLNNVTQVFSFDYKPLVPYKSVNDTAMFYGMKYYNDLLMEAGPSGNVQSEVLMRKNKKTFTLKQGWAFPHKVYFNGDECMLPPPDTYPFLPNSANSLKNLLTFSLFILSFLFFLFV 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1244 436 Pfam COBRA-like protein 47 210 IPR006918 GO:0010215|GO:0016020
Prci1g1244 436 PIRSF COBRA 1 436 IPR006918 GO:0010215|GO:0016020
Prci1g1244 436 PANTHER PROTEIN COBRA 13 426 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1244 Prci-Chr1 25315825 25321001 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1244 5 436 COBRA Gene Family AT3G29810 63.657 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1244 - - gmx:100783410 779.63