Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1239 ATGGGTGATCCTTTCACCATTTCTAGCACAGAAAACAAGTTCATAAATGTTGGTTGTGATACCTACGGCTACTTAAATAGTTTCTTGAAAAACAGTAGTACCGTTTATTCCACCGGCTGTTTAACGCGATACTACACATTTCCGAGGGAGATGTATGCTAAAAACTGTTCAGGGATTGGGTGCTGCCAGGTGGACGTTCCTGTTGGAATGAGGGATATCACTTTTGAAGCATATGGCTTCAAGAACCATATGGATATTTCGGAATTTAACAATTATAGCTATGCTTTTGTTGTTAAAAAGGACTGGACAAGATCAGGCTATGCTTGCACCAACAACACTGATTGTGTGGATTCACCTGATGGATTTGGGTACAACTGCTGGTGCAAACAAGGTTTCGATGGAAACCCATACCATCCTATGGATGTCATGAGGAATCTCATCAAACAAAAGGAACATTTTTTTCGACAAAATGGTGGCTTGATTTTGGAACAACGACTCTTTGCTGAAGAAGCTTCCTCCCAAACAGGAAAAATATTCACCACGCAGGAGTTGAAGAAGGCTTCCAACAACTACCATGATAGCTTAATCTTTGGAAAAGGAGGTTATGGAATTGTTTACAAGGGATTTCTCCCAGACAACAAAGTTATTGCAGTCAAGAAATCCAAACTTGTAGATCAAAACCAAATTGAAGAATTCATCAATGAGGTGGGCATCCTCTCGCAAATAAATCACAAGAATGTGGTGAAGCTACTTGGATGTTGTTTGAAAATTGAAATTCCTTTATTAGTTTATGAGTTTGTCAGCAATGGAACCCTTTATGATTTTATTCATAACCAAGAGCGCTCTTCCGGAGCACTCTTCGACGAGCGCTCCCGAAGATTAGCTCTCCAAGAGCGCTCTGGAAGAGAGCTCGGGCTCTTCCAGAGTGCTCGTGAAGGAGCACTCCGGAAGAGCGCTCGGAAGACGCTCTTCCGGAGCGCTCATGAATGA 990 0.4212 MGDPFTISSTENKFINVGCDTYGYLNSFLKNSSTVYSTGCLTRYYTFPREMYAKNCSGIGCCQVDVPVGMRDITFEAYGFKNHMDISEFNNYSYAFVVKKDWTRSGYACTNNTDCVDSPDGFGYNCWCKQGFDGNPYHPMDVMRNLIKQKEHFFRQNGGLILEQRLFAEEASSQTGKIFTTQELKKASNNYHDSLIFGKGGYGIVYKGFLPDNKVIAVKKSKLVDQNQIEEFINEVGILSQINHKNVVKLLGCCLKIEIPLLVYEFVSNGTLYDFIHNQERSSGALFDERSRRLALQERSGRELGLFQSAREGALRKSARKTLFRSAHE 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1239 329 FunFam Wall-associated receptor kinase 2 161 266 - -
Prci1g1239 329 SUPERFAMILY Protein kinase-like (PK-like) 172 282 IPR011009 -
Prci1g1239 329 Gene3D Phosphorylase Kinase; domain 1 160 266 - -
Prci1g1239 329 Pfam Protein tyrosine and serine/threonine kinase 197 282 IPR001245 GO:0004672|GO:0006468
Prci1g1239 329 ProSiteProfiles Protein kinase domain profile. 191 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1239 329 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 4 291 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1239 Prci-Chr1 24352835 24358852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1239 148 290 Receptor kinase-like Gene Family AT1G21250 55.944 1.98e-48 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Prci1g1239 PK_Tyr_Ser-Thr 2.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1239 - - pcin:129322693 682.945