Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1215 ATGGCAGATCACCGGCCTTCTCTGCCAGCACCACCACCAAAAGGCTACAAATTAACAGCCTCTTCAATCTCCTACGCCAAAAGCACCACCATGAGTATTTCCACATTCTTGCAGCTTCTCAAATGGTGCACCGCAACATCGCCTCCTTCTTACATCCTCAAGAACGTTTCCCTCACTGCCTATCCCTCCCAGATCCTCGCCATCGTGGGCCCAAGTGGCGCCGGCAAGTCCACCCTACTTGACATCCTGGCCGCCCGCACTTCAGCCACCTCCGGCAGCCTTCTCCTCAACTCCTCCCCCTTCAATCCTTCCTCCTTTCGCAAGCTCTCTTCTTACGTCCCACAACACGACGCCTGCCTCCCCCTCCTTACCGTGGATGAGACCTTCGCCTTCGCAGCCCGCCTCCTCCAGCCCAAGCCCTTCGACACCTCCTCTCTTCTCGCCGAGCTTGGCCTCAGTCACTTAGCTCACACCAGGCTCGCCGATGGGCTTTCCGGTGGGGAGCGAAGACGGGTCTCCATCGGCCTCAGCCTCCTCCACGACCCTGTCGTGCTGCTTTTGGATGAGCCCACCTCCGGCCTTGACAGCACTGGTGCTTTCAACGTCATGCAGATTCTGAAATCAATCTGCGTTTCTCGTCACCGAACCATTGTGCTATCTATTCACCAACCAAGCTTCAAGATTTTGTCTGTCATTGATAGAATCTTGCTTCTCTCAAAAGGATCAGTAGTTCACCATGGAAGTCTTGCTTCGCTTCAGAGTTTTCTTCATACAAATGGCTTCTCTGTCCCTCCTCAGCTCAACGCCTTAGAATATTCCATGGAAATATTGAGCCAACTAGATGAGCTTGAACCCATGAACGACACTACTGATGAAGATCACAGTCGCGCAAGTTCTCCATCTCAAAATTTAACCACCACTTTACCTTCAAGAAAGATGATCCGATATAGGAGCTCAAGAGTCCATGAAATCTGCGCTCTGTATGGCAGATTTTGGAAGATCATTTACAGAACAAAGCAGTTACTTCTGACCAACACAATAGAAGCACTTCTCGTAGGCCTTGTCCTTGGAACCATTTACATCGACATAGGCTTCGACAAGGAGGGCATCGAGAAAAGCTTGCCCAAATACTGGTTGTTCATGCATTTCTTTTCTATGTACAAGAAGCGATGTGATGAACAAGAGAGGACTCAGCGAGGCAGAGAGATGGACTAA 1215 0.507 MADHRPSLPAPPPKGYKLTASSISYAKSTTMSISTFLQLLKWCTATSPPSYILKNVSLTAYPSQILAIVGPSGAGKSTLLDILAARTSATSGSLLLNSSPFNPSSFRKLSSYVPQHDACLPLLTVDETFAFAARLLQPKPFDTSSLLAELGLSHLAHTRLADGLSGGERRRVSIGLSLLHDPVVLLLDEPTSGLDSTGAFNVMQILKSICVSRHRTIVLSIHQPSFKILSVIDRILLLSKGSVVHHGSLASLQSFLHTNGFSVPPQLNALEYSMEILSQLDELEPMNDTTDEDHSRASSPSQNLTTTLPSRKMIRYRSSRVHEICALYGRFWKIIYRTKQLLLTNTIEALLVGLVLGTIYIDIGFDKEGIEKSLPKYWLFMHFFSMYKKRCDEQERTQRGREMD 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1215 404 ProSitePatterns ABC transporters family signature. 164 178 IPR017871 GO:0005524|GO:0016887
Prci1g1215 404 Gene3D - 40 296 IPR027417 -
Prci1g1215 404 Pfam ABC transporter 53 192 IPR003439 GO:0005524
Prci1g1215 404 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 255 IPR027417 -
Prci1g1215 404 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 265 IPR003439 GO:0005524
Prci1g1215 404 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 18 386 - -
Prci1g1215 404 SMART AAA_5 62 242 IPR003593 GO:0016887
Prci1g1215 404 Pfam ABC-2 type transporter 222 284 IPR043926 GO:0140359
Prci1g1215 404 FunFam ATP-binding cassette transporter 43 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1215 Prci-Chr1 23110775 23112791 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1215 48 259 Calmodulin-binding Proteins AT2G36910 27.615 5.75e-17 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1215 K05681 - cave:132167224 508.449