Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1212 ATGCCTTCTCCTGCTACTACTGCCACGTCATCAGGTTCCGGCCAAACCATATGCGTCACTGGCGCCGGCGGCTTCATCGCCTCATGGATTATCAAGCTTCTCTTAGAGAGAGGTTACACTGTTAGAGGCACCGTCAGAAATCCAGATGATTCTAAGAACGAACACTTGAAAAATCTGGAAGGAGCACAGGAGAGGCTAACTCTTCATAAAATTGATCTCCTTGATGATCTCAAGTCCATGAAAGCTGTTATTAATGGCTGTGATGGTGTTATTCATACCGCCTCTCCCATCACAGACAATCCTGAAGAGATGCTGAAACCGGCGGTAAATGGAACAAAGAATGTGATGACAGCAGCTGCAGAAGCAAAAGTGCGTAGAGTTGTGTTCACGTCATCTATTGGAGCTGTCTACATGGACCCCAATAGGAGCATTGACATGGTGATTGATGAGTCTTGCTGGAGCGATTTGGAATATTGCAAGAACACTAAGAATTGGTATTGCTATGGGAAGGCAGTGGCAGAGCAGGTAGCATGGGATGAGGCAAGAGCAAGAGGGGTGGACTTGGTTGTGTTGAACCCGGTTTTGGTGGTGGGACCTTTGCTCCAATCCACCATAAATAAGAGCACAATGCACATTCTTAAGTATCTCACAGGCGCTGTCAAAACCTATGTAAATGCCACTCATGCTTATGTTCATGTTAGGGATGTGGCATTGGCCCATATTTTAGTTTATGAGATTCCTTCTACTTCTGGTCGTTACTTATGTTCTGAGAGGTCACTCCACCGTGGAGAGGTGGTTGAAATTCTAGCCGGGTACTTCCCAGAATACCCAATTCCTACCAAATGTTCAGATGAGAAGAATCCAAGAGTAAAGCCCTACAAATTCTCTAATCAGAAGCTGAAGGATTTAGGGTTGGAGTTTACCCCAGTGAAGCAGGCCCTTTATGAAACTGTCAAGAACCTACAAGATAAAGGCCATCTTCCTCTTCCTTCCATGAAAGTTGAAGCTGTTGAGATTAAATCCTGGACAGCTAGACTCTAA 1041 0.4515 MPSPATTATSSGSGQTICVTGAGGFIASWIIKLLLERGYTVRGTVRNPDDSKNEHLKNLEGAQERLTLHKIDLLDDLKSMKAVINGCDGVIHTASPITDNPEEMLKPAVNGTKNVMTAAAEAKVRRVVFTSSIGAVYMDPNRSIDMVIDESCWSDLEYCKNTKNWYCYGKAVAEQVAWDEARARGVDLVVLNPVLVVGPLLQSTINKSTMHILKYLTGAVKTYVNATHAYVHVRDVALAHILVYEIPSTSGRYLCSERSLHRGEVVEILAGYFPEYPIPTKCSDEKNPRVKPYKFSNQKLKDLGLEFTPVKQALYETVKNLQDKGHLPLPSMKVEAVEIKSWTARL 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1212 346 FunFam Cinnamoyl-CoA reductase 1 8 340 - -
Prci1g1212 346 CDD FR_SDR_e 18 305 - -
Prci1g1212 346 Gene3D - 6 341 - -
Prci1g1212 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 321 IPR036291 -
Prci1g1212 346 Pfam NAD dependent epimerase/dehydratase family 17 247 IPR001509 -
Prci1g1212 346 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 16 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1212 Prci-Chr1 22949756 22957379 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1212 14 281 Monolignol Biosynthesis Gene Families AT1G80820 72.015 1.06e-138 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1212 K09753 - gmx:100789070 536.569