Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1198 ATGGTTCAGGAGTATAGATTGATAGGATCTTTCATAGATTTACAACAAGATGCACCACTAAAAGCATTAGTTGGTGCTTATTCCACGGAGGTCAACAATGATTTCTGGAAGGAATTGAGAATGGTACAGTTAGAAGATGAATATCTATTTGAAATTAGTGAAGAAATTGAAGCGAATAAAACTATAGATTTTAGCTTTAAAGATAATGGTTTCATGGTCTATTGGGACAAAATTTATGTGCTTGATGATGCAGATCTAAGGAAAGTTATTCTGAATAAAGCTCATTGTAGTAAGTATATGATCGATCCGAGAGCTATGAAGATGTATCAAGATATGGGCAATATTAGTAGATGTCAGAAAAAACTTATTAAGACTAGAATCATCACGCCTTCTCCTGCTACTAATGCCACGCCATCAGGTTTCGGCCAAACCATATGTGTCACTGGCGCCGGTGGCTTCATCGCCTCATGGATTGTCAAGCTCCTCTTAGACAGAGGTTACACTGTTAGAGGCACAGTCAGAAATCCAGACGATTCTAAGAACGAACACTTGAAAAATCTGGAAGGAGCACAGGAGAGGCTAACTCTTCATAAAATTGATCTTCTTGATGATCTCAAGTCCATGAAAGCTGTTATTAATGGCTGTGATGGTGTTATTCATACCGCTTCTCCCATCACAGACAATCCTGAAGAGATGATGAAACCGGCGGTAAATGGAACGAAGAATGTGATGATAGCAGCTGCAGAAGCAAAAGTGCGTCGAGTTGTGTTCACGTCATCTATTGGAGCTGTCTACATGGACCCCAACAGGAGCATTGACATGTTGATTGATGAGTCTTGCTGGAGCGATTTGGAATATTGCAAGAACACTAATAATTGGTATTGCTATAGGAAGGCAGTAGCAGAGCAAGGAGCATGGAATGAGGCAAGAGCAAGAGGGGTGGACTTGGTTGTGTTGAACCCGGTTTTGGTGGTGGGACCATTGCTCCAATCCACCATAAATAGGAGCACAACGCACATTCTTAAGTATCTCACAGGCGCTGTCAAAACCTATGTAAATGCCACTCATGCTTATGTTCATGTCAAGGATGTGCCATTGGCCCATATTTTAGTTTGGGAGATTCCTTCTGCTTCTGGTCGTTACTTATGTTCTGAGAGGTCACTCCACCGTGGAGAGGTGGTTGAAATTCTAGCCGAGTACTTCCCAGAATACCCAATTGCTACCAAGTGTTCAGATGAGAAGAATCCAAGAGTAAAGCCCTACAAATTCTCTAATCAAGAGCTGAAGGATTTAGGGTTGGAGTTTACCCTAGTGAAGCAGGCTCTATACGAAGCAGTCAAGAACCTACAAGATAAAGGCCATCTTCCTCTTCCAAAGTAG 1380 0.4174 MVQEYRLIGSFIDLQQDAPLKALVGAYSTEVNNDFWKELRMVQLEDEYLFEISEEIEANKTIDFSFKDNGFMVYWDKIYVLDDADLRKVILNKAHCSKYMIDPRAMKMYQDMGNISRCQKKLIKTRIITPSPATNATPSGFGQTICVTGAGGFIASWIVKLLLDRGYTVRGTVRNPDDSKNEHLKNLEGAQERLTLHKIDLLDDLKSMKAVINGCDGVIHTASPITDNPEEMMKPAVNGTKNVMIAAAEAKVRRVVFTSSIGAVYMDPNRSIDMLIDESCWSDLEYCKNTNNWYCYRKAVAEQGAWNEARARGVDLVVLNPVLVVGPLLQSTINRSTTHILKYLTGAVKTYVNATHAYVHVKDVPLAHILVWEIPSASGRYLCSERSLHRGEVVEILAEYFPEYPIATKCSDEKNPRVKPYKFSNQELKDLGLEFTLVKQALYEAVKNLQDKGHLPLPK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1198 459 Pfam NAD dependent epimerase/dehydratase family 145 374 IPR001509 -
Prci1g1198 459 CDD FR_SDR_e 146 433 - -
Prci1g1198 459 Gene3D - 135 459 - -
Prci1g1198 459 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 144 445 - -
Prci1g1198 459 FunFam Cinnamoyl-CoA reductase 1 136 459 - -
Prci1g1198 459 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 142 448 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1198 Prci-Chr1 21932116 22010686 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1198 142 409 Monolignol Biosynthesis Gene Families AT1G80820 69.776 4.11e-131 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1198 K09753 - gmx:100796771 516.153