Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1188 ATGGCCGAAGACTGGGATCTCTCCGCCGTCGTGCGAGGTTGCAGATCATCCTCTCTTGCCGCCAGTACCACCACCACCACTGCTAGTTCTACTTCTATTACGTCGTCGTCGTCGTCTTCTTCTTCTTCTTCCAAGGTCAACGTTTCTTTACCATTCATCAAGCAAGAAAATGACGTCCTCTCTTTTTCCAGTTTGGCACAATCCAGAACCAATGGGTTCCAAGAACTACACCAATTGTTTATACCCTTTATCCCCACCACCACTATCTCTACTAGTGCTTGTGGCATCTATCCCAATTCCTCTTTTACTAATTTTCCAGTAGCTGCAGGGTCCAGTAGCAGTGAAAATGACAACAACAACAACAATGATAATTGTAATACTGCGCCACTTGTGGCATCTGCTTCTTCTTACGCGTCCAATAGTAGGCCTCATTTTATTCCACAAGCCTCATCCCCCACTTCTTCTTCTGGCTTTCAAAAATTCCATGACCAAAATCAACTACAACTAGTTCCTCAGAAACAGCAATTTCAAATACCACCAGGTCAGATCAGTGGCGGCGGCGGTAGTAATAATAATTCTGGTATGACTTTACCTGCTCAAGCAACCAGATCGAGAAAAAGAAAGAGTCAACAGAAAAGAATGGTTTGCCATGTCACAGCTGAAAACCTCACGGCGGATTCGTGGGCGTGGAGAAAATATGGCCAAAAGCCCATTAAAGGTTCTCCATATCCAAGGAACTATTACAGATGCAGCAGTTCAAAAGGTTGTGGGGCACGGAAGCAAGTAGAACGGAGCAATACTGAACCAGATATGTTCATCGTCACCTACACCGGAGAACACACGCATCCCTTACCCACCCACCGGAACTCACTCGCCGGTAGTACCAGGAACAAACCATCGACGACGACGACGATGCGTCAACCCGACTCTCTTGATGAATCTGTTTCGCCTGGCAATAATACAGCAAACCGGGCATTGTCATCTTCACAGCTTTCTCCGACAACGCCTTTGACGGCGGTGGCGGCTAACGACGAGTGCGCTGACGAACCCATGTTAAGCAACAATGAAGCCACTAGCCCCTTTCCTGAAGATGAGTTACCCTTGGACTCTCATGATGAAATTTTGATACCAAACATGGCGGCCATGATGGATAAGTTCTTGCTAGGTGCTGGCGACCTCCACGGAGGAATCGGAATTGGTGGCGGAGGGGAAAATAGCACAAGTGGCAATCTGGCGGATGGGTCATATCCGAATCCTGAACCCGGTTTGACTCCTAATCTGCAAAAGCACTTCTCCCCCCTCAGCCGGTCTAGTCCTGGTTGA 1323 0.4792 MAEDWDLSAVVRGCRSSSLAASTTTTTASSTSITSSSSSSSSSSKVNVSLPFIKQENDVLSFSSLAQSRTNGFQELHQLFIPFIPTTTISTSACGIYPNSSFTNFPVAAGSSSSENDNNNNNDNCNTAPLVASASSYASNSRPHFIPQASSPTSSSGFQKFHDQNQLQLVPQKQQFQIPPGQISGGGGSNNNSGMTLPAQATRSRKRKSQQKRMVCHVTAENLTADSWAWRKYGQKPIKGSPYPRNYYRCSSSKGCGARKQVERSNTEPDMFIVTYTGEHTHPLPTHRNSLAGSTRNKPSTTTTMRQPDSLDESVSPGNNTANRALSSSQLSPTTPLTAVAANDECADEPMLSNNEATSPFPEDELPLDSHDEILIPNMAAMMDKFLLGAGDLHGGIGIGGGGENSTSGNLADGSYPNPEPGLTPNLQKHFSPLSRSSPG 440
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1188 440 SMART WRKY_cls 224 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1g1188 440 Gene3D WRKY domain 208 286 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci1g1188 440 MobiDBLite consensus disorder prediction 404 440 - -
Prci1g1188 440 Pfam WRKY DNA -binding domain 226 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1g1188 440 FunFam WRKY transcription factor 22 207 278 - -
Prci1g1188 440 ProSiteProfiles WRKY domain profile. 219 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci1g1188 440 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 359 IPR044810 GO:0003700
Prci1g1188 440 MobiDBLite consensus disorder prediction 177 204 - -
Prci1g1188 440 MobiDBLite consensus disorder prediction 279 334 - -
Prci1g1188 440 MobiDBLite consensus disorder prediction 282 334 - -
Prci1g1188 440 SUPERFAMILY WRKY DNA-binding domain 218 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci1g1188 440 MobiDBLite consensus disorder prediction 17 44 - -
Prci1g1188 440 MobiDBLite consensus disorder prediction 177 214 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci1g1188 Prci-Chr1 20933667 20935762 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1188 203 352 WRKY Transcription Factor Family AT5G52830 64.935 3.00e-60 198
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci1g1188 WRKY 3e-26 CL0274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1188 - - pcin:129285324 726.857