Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci1g1188 | ATGGCCGAAGACTGGGATCTCTCCGCCGTCGTGCGAGGTTGCAGATCATCCTCTCTTGCCGCCAGTACCACCACCACCACTGCTAGTTCTACTTCTATTACGTCGTCGTCGTCGTCTTCTTCTTCTTCTTCCAAGGTCAACGTTTCTTTACCATTCATCAAGCAAGAAAATGACGTCCTCTCTTTTTCCAGTTTGGCACAATCCAGAACCAATGGGTTCCAAGAACTACACCAATTGTTTATACCCTTTATCCCCACCACCACTATCTCTACTAGTGCTTGTGGCATCTATCCCAATTCCTCTTTTACTAATTTTCCAGTAGCTGCAGGGTCCAGTAGCAGTGAAAATGACAACAACAACAACAATGATAATTGTAATACTGCGCCACTTGTGGCATCTGCTTCTTCTTACGCGTCCAATAGTAGGCCTCATTTTATTCCACAAGCCTCATCCCCCACTTCTTCTTCTGGCTTTCAAAAATTCCATGACCAAAATCAACTACAACTAGTTCCTCAGAAACAGCAATTTCAAATACCACCAGGTCAGATCAGTGGCGGCGGCGGTAGTAATAATAATTCTGGTATGACTTTACCTGCTCAAGCAACCAGATCGAGAAAAAGAAAGAGTCAACAGAAAAGAATGGTTTGCCATGTCACAGCTGAAAACCTCACGGCGGATTCGTGGGCGTGGAGAAAATATGGCCAAAAGCCCATTAAAGGTTCTCCATATCCAAGGAACTATTACAGATGCAGCAGTTCAAAAGGTTGTGGGGCACGGAAGCAAGTAGAACGGAGCAATACTGAACCAGATATGTTCATCGTCACCTACACCGGAGAACACACGCATCCCTTACCCACCCACCGGAACTCACTCGCCGGTAGTACCAGGAACAAACCATCGACGACGACGACGATGCGTCAACCCGACTCTCTTGATGAATCTGTTTCGCCTGGCAATAATACAGCAAACCGGGCATTGTCATCTTCACAGCTTTCTCCGACAACGCCTTTGACGGCGGTGGCGGCTAACGACGAGTGCGCTGACGAACCCATGTTAAGCAACAATGAAGCCACTAGCCCCTTTCCTGAAGATGAGTTACCCTTGGACTCTCATGATGAAATTTTGATACCAAACATGGCGGCCATGATGGATAAGTTCTTGCTAGGTGCTGGCGACCTCCACGGAGGAATCGGAATTGGTGGCGGAGGGGAAAATAGCACAAGTGGCAATCTGGCGGATGGGTCATATCCGAATCCTGAACCCGGTTTGACTCCTAATCTGCAAAAGCACTTCTCCCCCCTCAGCCGGTCTAGTCCTGGTTGA | 1323 | 0.4792 | MAEDWDLSAVVRGCRSSSLAASTTTTTASSTSITSSSSSSSSSSKVNVSLPFIKQENDVLSFSSLAQSRTNGFQELHQLFIPFIPTTTISTSACGIYPNSSFTNFPVAAGSSSSENDNNNNNDNCNTAPLVASASSYASNSRPHFIPQASSPTSSSGFQKFHDQNQLQLVPQKQQFQIPPGQISGGGGSNNNSGMTLPAQATRSRKRKSQQKRMVCHVTAENLTADSWAWRKYGQKPIKGSPYPRNYYRCSSSKGCGARKQVERSNTEPDMFIVTYTGEHTHPLPTHRNSLAGSTRNKPSTTTTMRQPDSLDESVSPGNNTANRALSSSQLSPTTPLTAVAANDECADEPMLSNNEATSPFPEDELPLDSHDEILIPNMAAMMDKFLLGAGDLHGGIGIGGGGENSTSGNLADGSYPNPEPGLTPNLQKHFSPLSRSSPG | 440 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci1g1188 | 440 | SMART | WRKY_cls | 224 | 284 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Prci1g1188 | 440 | Gene3D | WRKY domain | 208 | 286 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Prci1g1188 | 440 | MobiDBLite | consensus disorder prediction | 404 | 440 | - | - | |
Prci1g1188 | 440 | Pfam | WRKY DNA -binding domain | 226 | 283 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Prci1g1188 | 440 | FunFam | WRKY transcription factor 22 | 207 | 278 | - | - | |
Prci1g1188 | 440 | ProSiteProfiles | WRKY domain profile. | 219 | 285 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Prci1g1188 | 440 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 4 | 359 | IPR044810 | GO:0003700 | |
Prci1g1188 | 440 | MobiDBLite | consensus disorder prediction | 177 | 204 | - | - | |
Prci1g1188 | 440 | MobiDBLite | consensus disorder prediction | 279 | 334 | - | - | |
Prci1g1188 | 440 | MobiDBLite | consensus disorder prediction | 282 | 334 | - | - | |
Prci1g1188 | 440 | SUPERFAMILY | WRKY DNA-binding domain | 218 | 285 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Prci1g1188 | 440 | MobiDBLite | consensus disorder prediction | 17 | 44 | - | - | |
Prci1g1188 | 440 | MobiDBLite | consensus disorder prediction | 177 | 214 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci1g1188 | Prci-Chr1 | 20933667 | 20935762 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci1g1188 | 203 | 352 | WRKY Transcription Factor Family | AT5G52830 | 64.935 | 3.00e-60 | 198 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Prci1g1188 | WRKY | 3e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci1g1188 | - | - | pcin:129285324 | 726.857 |