Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1143 ATGGGAAGCACTGAAGTGATTGAAGGAGAGCGCGTGGAGGATGTTGGATTGGAAGAGACTGTATATGTTGCAGTGGGGAAGAACATAGAGAAGAGCCAACAGCTTCTGCACTGGGCATTGGATAATTGTGCCAAAAAGAAGATATGCGTGCTTCATGTTCATCGGCCTGAGCGTATATATTCTTTGAATGCTAAACCCAACGGGATTGAACCAGAAGGAAATAAAATAAAGGCATTCCAGGAACAGGAAAGGCAACAAGTGCATGAACTTTTAGATCAATATCTTCTCACTCTTACCCTGGAAGGGGTAGAGGCCAATAAAATGTTGATTGAAATGGATAGTATTGAGAAAGGAATTGAACATGCCATTGCTCAGCACAATATCAGATGGCTTGTCATGGGAGCTGCAGGAGAAGGATATCAGTCAGGTAAACTGGCAGATGAAGAGACGAAGAAAGCTGTTCTTGTACTTGAGCAAGCATCAGTACCCTGTAATATTTGGTTTATTTACAAGGGCAACCTCATATGTACAAGCGCAGATTGTAAACATATATCAGAAATTGAGACTAGTCCATCATTGTTGGTGATTAGTTCGAATACAGGAGGCAAAAAATCTAAGATCAATTCTGAATGTACTGCTAATTCACAGAAATATTTAGATGCTGAAAATATGGAAGGAATGCTCAGAAATTTTAGTTGCCATTGTTCCATAGAATCAACACAATCAAGTACTATGTTGACAGATTTGCTGTCTCTTAAGGAGGAAAGTGATGTGCACAATGATGCCAGAGAACAAGGTGAAAGACTGGAACTAGCTAATGTAGATGCTACAAGCTTTAAAACAAAGGAACCTATAGGAGTAGAGGAGAGCAGCAGCGTAGAAGATGACAATACTATGGAGGCTGAAGCATTAGAAAGCTTGTGTGCTATTGAGATTAGTCGAAGAAGAGAGCTTGAAGAACTATTGGCTCAGGAAAAGTATGAATTACTAAAACTGAAAGATCAACAAGATGAGACCATGGTTGAACTGCGAATGATCCAAGACCAAAATTCAGCACTTAACAGCCAAGTTGTTGATTCCCGGGCCATGGTAACAGAGTTGGAGGAGAAAATTTTATCTGCAGTGGAACTCTTGATTAGCTTCAAGGAAAAACGAGATAAGTTAAGGATTGAGCATGCAAATGCAGTCAGGGAAGTCAACAAGTTGAAGTTTGTGAATGCAGATTCTGAATATCCACATGAAGCAGAATTTCCCACATTTTCATTCTTAGAGATTAATGAGGCAACTAATGATTTTGATCCATCTTGGAAGATTGGAGAGGGAAGATATGGAAGTGTTTACAAAGGATTGCTTCACAATATGCAAGTTGCTGTAAGGATGTTACCTTCTTATGGCTGTCAGGGCCAACTGGAGTTCCAACATCAGGTTGAGGTTTTGAGTAGGGTAAGACATCCAAACATTGTCACACTGATTGGAAGCTGCCCGGAAACTAGATCGCTGGTCTATGATTACCTTAACAATGGCAGCCTTGAGGAACACCTTGCCCGCAAAGACAAGACTCCACTTCCTTGGCAAATTCGAATATCCATTGCTGCTGACATATGCTCTGCTCTTATCTTCCTTCACTCCAGCAAGCCTTGTATAATCCATGGGAATTTGAAGCCCAGTAAAATTCTCCTTGATGTGAACTTTGTTGCCAAACTTTGTGATTTGGGCATTTCTTCTTTGGTCCAGCGCAGTGGGCATTCAGCTGATAGTAACACAACAGTCAACAACAGAAATGAAAGTTCGGTGTATGTGGATACAGAATTTCTTATCACTGCAAAGCTCGTGCCAGAATCCGATGTGTATTCGTTCGGAATCATATTGTTACAGCTTTTAACAGGAAGACCTATTTCGGGAATAGTAAGGGATACAAAATGTGCATTGGAGAAGGAAAACCTAAAAGCGGTATTGGACATTTCAGCGGGAGAATGGCCACTTTATCAGGTTGAACAGCTGGCATATTTGGCATTGAGATGTTCTGAGAAGACCCGGATGAATCGGCCAGACCTTGTATCAGAAATCTGGAGTGTTCTTGGACCGTTAAAAACTTCATGTAGTAACACGTCACCATATTTGACTTCCAAGAAGCTTCATCGTCCTCCTTCTCACTTTGTCTGCCCCATATTTCAGGAGGTCATGAAAGATCCTTTTATAGCTGCAGATGGCTTTACGTATGAAGAAGACGCAATAAGAGGATGGTTGGATAGTGGTCACAATACTTCGCCAATGACAAACCTTCAGCTTGAACACACCAACCTGGTGCCTAACTATGCGTTACTCAATGCCATACAGGAGTGGCAGCAACTGCAATGA 2358 0.4139 MGSTEVIEGERVEDVGLEETVYVAVGKNIEKSQQLLHWALDNCAKKKICVLHVHRPERIYSLNAKPNGIEPEGNKIKAFQEQERQQVHELLDQYLLTLTLEGVEANKMLIEMDSIEKGIEHAIAQHNIRWLVMGAAGEGYQSGKLADEETKKAVLVLEQASVPCNIWFIYKGNLICTSADCKHISEIETSPSLLVISSNTGGKKSKINSECTANSQKYLDAENMEGMLRNFSCHCSIESTQSSTMLTDLLSLKEESDVHNDAREQGERLELANVDATSFKTKEPIGVEESSSVEDDNTMEAEALESLCAIEISRRRELEELLAQEKYELLKLKDQQDETMVELRMIQDQNSALNSQVVDSRAMVTELEEKILSAVELLISFKEKRDKLRIEHANAVREVNKLKFVNADSEYPHEAEFPTFSFLEINEATNDFDPSWKIGEGRYGSVYKGLLHNMQVAVRMLPSYGCQGQLEFQHQVEVLSRVRHPNIVTLIGSCPETRSLVYDYLNNGSLEEHLARKDKTPLPWQIRISIAADICSALIFLHSSKPCIIHGNLKPSKILLDVNFVAKLCDLGISSLVQRSGHSADSNTTVNNRNESSVYVDTEFLITAKLVPESDVYSFGIILLQLLTGRPISGIVRDTKCALEKENLKAVLDISAGEWPLYQVEQLAYLALRCSEKTRMNRPDLVSEIWSVLGPLKTSCSNTSPYLTSKKLHRPPSHFVCPIFQEVMKDPFIAADGFTYEEDAIRGWLDSGHNTSPMTNLQLEHTNLVPNYALLNAIQEWQQLQ 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1143 785 Gene3D Phosphorylase Kinase; domain 1 403 504 - -
Prci1g1143 785 Pfam Universal stress protein family 21 141 IPR006016 -
Prci1g1143 785 Gene3D Transferase(Phosphotransferase) domain 1 505 700 - -
Prci1g1143 785 PANTHER OS02G0152300 PROTEIN 20 780 - -
Prci1g1143 785 Coils Coil 315 335 - -
Prci1g1143 785 ProSiteProfiles Protein kinase domain profile. 432 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1143 785 SMART Ubox_2 718 781 IPR003613 GO:0004842|GO:0016567
Prci1g1143 785 Pfam U-box domain 716 782 IPR003613 GO:0004842|GO:0016567
Prci1g1143 785 SUPERFAMILY Protein kinase-like (PK-like) 410 685 IPR011009 -
Prci1g1143 785 Pfam Protein tyrosine and serine/threonine kinase 437 685 IPR001245 GO:0004672|GO:0006468
Prci1g1143 785 SUPERFAMILY RING/U-box 712 782 - -
Prci1g1143 785 ProSiteProfiles U-box domain profile. 714 785 IPR003613 GO:0004842|GO:0016567
Prci1g1143 785 CDD RING-Ubox_WDSUB1-like 716 771 - -
Prci1g1143 785 Gene3D HUPs 19 164 IPR014729 -
Prci1g1143 785 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 23 143 - -
Prci1g1143 785 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 714 785 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1143 Prci-Chr1 18526624 18597244 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1143 76 782 U-box Gene Family AT3G49060 44.818 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Prci1g1143 PK_Tyr_Ser-Thr 2.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1143 - - pcin:129304798 1545.79