Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1125 ATGGAGCAGAAATGCGCTTTGTTGTCAGCATTGAGCGTAGGGGTTGGTCTGGGAGTGGGGCTTGGATTGAGTTCAGGGCAGGTGGTTCAGAAATGGGTTGGAAGGAATCGTGAGCTCTCTGGTGAGCAGATTGAGCTGGAGCTTTTGAGGCTGGTGATTGATGGCAAGGAATGCAAGGAAACTTTTGATGAGTTTCCTTACTATTTAAGTAAAAGAACACGTGAGTTATTGACAAATGCTGCATTTGTTCATTTAAAACAACTTCACTTTTCGAAACACACCCGTAACCTGTCACCAGCAAGCAGGGCAATTCTGCTTTCTGGACCTACAGAACTTTACATGCAAAAACTTGCCAAGGCTTTAGCGCAACACTTTGAGTCAAAGTTGCTGCTGCTAGATATCCCTGACTTCTCTTTCAAGGTGGAAAGCAAACATGGATGTGCAAAAAAAGAACCATCTTTTCAAAGGTCCTTATCTGAGGTGACTCTTGAGCGAGTGTCCAGTCTTTTTGGTTCCTTTTCAGTTCTCCCTTCAACTGGAAAAACTAAAGGCATTTTACGCGCACACAGTAATAGTACTGGAAGTTCCAATGCATCTCCAAAACTTAGTAGCAATGCCTCTACTGCATCTGATATGAGTAGTCCCTTGAAGAACACAAGTAGCTTGTGTCTTGATGAAAAACTCTTTATACAGTCGCTTTACAAGGTCTTGGTATCTGTCTCAGAAAAAAGTTCCATCATTTTATACATTAGGGATGCTGAGAAGATTTTCCTCCAATCAGAACGGCTGTATAATTTGTTTCATAAAATGCTTGAGAAACTTTCAGGGCCAGTGATGGTAATTGGTTCCCAGATATTAGATTCGGGAGTTGATGAAAGTCCCGCAACATTATTTCCTTACAACATTGGGGTTAAACCACCAGAAGATGATTGCAACGCCCTACAAGAAGATAATATGAAAATAATTCAGTTTCAAGATAACAAAAAACACATTGCTGAAGTACTTGCAGCCAATGATATTGAATGTAATGACTTGAATTCAATCTGCCATGCAGACACAAGGGTACTAAGTAAATATATTGAAGAAATTGTGGTATCTGCAATACATTACTACTTGATGAATACCACGGATCCAGAATACCGAAATGGGAAGCTAGTAATATCATCCGAGAGTTTGTCCCATGGTTTGAATCTATTTCAAGAAGGCAATAGTAGCTCTGAGGACACCCTGAAGCTGGAGACCAGTGGAAAAAAGGAAGTTCCTCCTGACAATGAGTTTGAGAAGCACATTAGACCAGAGGTCATCCCTGCAAATGAGATCGGAGTTACATTTGCAGATATTGGTGCATTAGATGAAATTAAAGAGTCACTCCAAGAGCTGGTCATGCTTCCTCTTCGAAGGCCAGATCTCTTCAAAGGTGGTCTTCTTAAACCTTGTAGGGGTATACTGCTCTTTGGACCTCCAGGTACTGGAAAAACAATGCTTGCAAAGGCAATTGCAAATGAAGCTGGAGCAAGCTTTATCAATATCTCAATGTCTACCATCACTTCAAAATGGTTTGGAGAAGACGAGAAAAATGTCCGAGCTCTGTTCACATTGGCAGCAAAGGTAGCCCCAACTATTATTTTTGTTGATGAGGTTGATAGCATGCTTGGGCAGCGAACAAGAGTTGGAGAACATGAGGCGATGAGGAAGATTAAAAATGAATTCATGATGCACTGGGATGGTCTATTGACAAAACCTGGGGAGCAAATTCTAGTCCTTGCTGCAACCAACAGGCCATTTGACCTTGATGAAGCAATCATACGACGGTTTGAGCGAAGAATCATGGTTGGCCTTCCATCTGTTGAGAACAGGGAAATGATCTTGAAGACTCTACTAGCTAAGGAAAAGACTGAAAATTTAGACTTCAAAGATCTTGCAATCATGACAGAAGGATACAGTGGAAGTGATATTAAGCATTTGTGCACAACTGCTGCTTATCGACCTGTTAGGGAGCTCATGAAGCAGGAGAGATTAAAAGATATGAATAAAAAAGCTGCTGCAGAACAATGCTCAGAGGATGCATCAGATACTAAGGGGGATGGAGAAGAGCGAGTAATTACCTTGAGGCCTTTAAACATGGAAGACATGAGACAGGCTAAGAGTCAGGTTGCTGCAAGTTTTGCTGATGAAGGATCAATGATGGCTGAGCTGAAGCAGTGGAATGAGGTATATGGAGAAGGAGGTTCAAGAAAGAAAAAGAAACTCACTTACTTCATTTAG 2265 0.4141 MEQKCALLSALSVGVGLGVGLGLSSGQVVQKWVGRNRELSGEQIELELLRLVIDGKECKETFDEFPYYLSKRTRELLTNAAFVHLKQLHFSKHTRNLSPASRAILLSGPTELYMQKLAKALAQHFESKLLLLDIPDFSFKVESKHGCAKKEPSFQRSLSEVTLERVSSLFGSFSVLPSTGKTKGILRAHSNSTGSSNASPKLSSNASTASDMSSPLKNTSSLCLDEKLFIQSLYKVLVSVSEKSSIILYIRDAEKIFLQSERLYNLFHKMLEKLSGPVMVIGSQILDSGVDESPATLFPYNIGVKPPEDDCNALQEDNMKIIQFQDNKKHIAEVLAANDIECNDLNSICHADTRVLSKYIEEIVVSAIHYYLMNTTDPEYRNGKLVISSESLSHGLNLFQEGNSSSEDTLKLETSGKKEVPPDNEFEKHIRPEVIPANEIGVTFADIGALDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINISMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMMHWDGLLTKPGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREMILKTLLAKEKTENLDFKDLAIMTEGYSGSDIKHLCTTAAYRPVRELMKQERLKDMNKKAAAEQCSEDASDTKGDGEERVITLRPLNMEDMRQAKSQVAASFADEGSMMAELKQWNEVYGEGGSRKKKKLTYFI 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1125 754 Gene3D - 441 613 IPR027417 -
Prci1g1125 754 MobiDBLite consensus disorder prediction 186 211 - -
Prci1g1125 754 Gene3D - 614 683 - -
Prci1g1125 754 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 44 753 - -
Prci1g1125 754 SMART AAA_5 478 615 IPR003593 GO:0016887
Prci1g1125 754 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 441 616 - -
Prci1g1125 754 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 441 669 IPR027417 -
Prci1g1125 754 Pfam AAA+ lid domain 634 677 IPR041569 -
Prci1g1125 754 MobiDBLite consensus disorder prediction 398 424 - -
Prci1g1125 754 ProSitePatterns AAA-protein family signature. 585 604 IPR003960 GO:0005524|GO:0016887
Prci1g1125 754 Pfam ATPase family associated with various cellular activities (AAA) 482 612 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1125 Prci-Chr1 17846080 17853763 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1125 442 684 Calmodulin-binding Proteins AT3G56690 38.866 1.96e-44 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1125 - - pcin:129318041 1365.52