Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1124 ATGGAGCAGAAATGCGCTTTGTTGTCAGCATTGAGCGTAGGGGTTGGTCTGGGAGTGGGGCTTGGATTGAGTTCAGGGCAGGTGGTTCAGAAATGGGTTGGAAGGAATCGTGAGCTCTCTGGTGAGCAGATTGAGCTGGAGCTTTTGAGGCTGGTGATTGATGGCAAGGAATGCAAGGAAACTTTTGATGAGTTTCCTTACTATTTAAGTAAAAGAACACGTGAGTTATTGACAAATGCTGCATTTGTTCATTTAAAACAACTTCACTTTTCGAAACACACCCGTAACCTGTCACCAGCAAGCAGGGCAATTCTGCTTTCTGGACCTACAGAACTTTACATGCAAAAACTTGCCAAGGCTTTAGCGCAACACTTTGAGTCAAAGTTGCTGCTGCTAGATATCCCTGACTTCTCTTTCAAGGTGGAAAGCAAACATGGATGTGCAAAAAAAGAACCATCTTTTCAAAGGTCCTTATCTGAGGTGACTCTTGAGCGAGTGTCCAGTCTTTTTGGTTCCTTTTCAGTTCTCCCTTCAACTGGAAAAACTAAAGGCATTTTACGCGCACACAGTAATAGTACTGGAAGTTCCAATGCATCTCCAAAACTTAGTAGCAATGCCTCTACTGCATCTGATATGAGTAGTCCCTTGAAGAACACAAGTAGCTTGTGTCTTGATGAAAAACTCTTTATACAGTCGCTTTACAAGGTCTTGGTATCTGTCTCAGAAAAAAGTTCCATCATTTTATACATTAGGGATGCTGAGAAGATTTTCCTCCAATCAGAACGGCTGTATAATTTGTTTCATAAAATGCTTGAGAAACTTTCAGGGCCAGTGATGGTAATTGGTTCCCAGATATTAGATTCGGGAGTTGATGAAAGTCCCGCAACATTATTTCCTTACAACATTGGGGTTAAACCACCAGAAGATGATTGCAACGCCCTACAAGAAGATAATATGAAAATAATTCAGTTTCAAGATAACAAAAAACACATTGCTGAAGTACTTGCAGCCAATGATATTGAATGTAATGACTTGAATTCAATCTGCCATGCAGACACAAGGGTACTAAGTAAATATATTGAAGAAATTGTGGTATCTGCAATACATTACTACTTGATGAATACCACGGATCCAGAATACCGAAATGGGAAGCTAGTAATATCATCCGAGAGTTTGTCCCATGGTTTGAATCTATTTCAAGAAGGCAATAGTAGCTCTGAGGACACCCTGAAGCTGGAGACCAGTGGAAAAAAGGAAGTTCCTCCTGACAATGAGTTTGAGAAGCACATTAGACCAGAGGTCATCCCTGCAAATGAGATCGGAGTTACATTTGCAGATATTGGTGCATTAGATGAAATTAAAGAGTCACTCCAAGAGCTGGTCATGCTTCCTCTTCGAAGGCCAGATCTCTTCAAAGGTGGTCTTCTTAAACCTTGTAGGGGTATACTGCTCTTTGGACCTCCAGGTACTGGAAAAACAATGCTTGCAAAGGCAATTGCAAATGAAGCTGGAGCAAGCTTTATCAATATCTCAATGTCTACCATCACTTCAAAATGGTTTGGAGAAGACGAGAAAAATGTCCGAGCTCTGTTCACATTGGCAGCAAAGGTAGCCCCAACTATTATTTTTGTTGATGAGGTTGATAGCATGCTTGGGCAGCGAACAAGAGTTGGAGAACATGAGGCGATGAGGAAGATTAAAAATGAATTCATGATGCACTGGGATGGTCTATTGACAAAACCTGGGGAGCAAATTCTAGTCCTTGCTGCAACCAACAGGCCATTTGACCTTGATGAAGCAATCATACGACGGTTTGAGCGAAGAATCATGGTTGGCCTTCCATCTGTTGAGAACAGGGAAATGATCTTGAAGACTCTACTAGCTAAGGAAAAGACTGAAAATTTAGACTTCAAAGATCTTGCAATCATGACAGAAGGATACAGTGGAAGTGATATTAAGCATTTGTGCACAACTGCTGCTTATCGACCTGTTAGGGAGCTCATGAAGCAGGAGAGATTAAAAGATATGGAAAAGAATAAAAAAGCTGCTGCAGAACAATGCTCAGAGGATGCATCAGATACTAAGGGGGATGGAGAAGAGCGAGTAATTACCTTGAGGCCTTTAAACATGGAAGACATGAGACAGGCTAAGAGTCAGGTTGCTGCAAGTTTTGCTGATGAAGGATCAATGATGGCTGAGCTGAAGCAGTGGAATGAGGTATATGGAGAAGGAGGTTCAAGAAAGAAAAAGAAACTCACTTACTTCATTTAG 2271 0.4139 MEQKCALLSALSVGVGLGVGLGLSSGQVVQKWVGRNRELSGEQIELELLRLVIDGKECKETFDEFPYYLSKRTRELLTNAAFVHLKQLHFSKHTRNLSPASRAILLSGPTELYMQKLAKALAQHFESKLLLLDIPDFSFKVESKHGCAKKEPSFQRSLSEVTLERVSSLFGSFSVLPSTGKTKGILRAHSNSTGSSNASPKLSSNASTASDMSSPLKNTSSLCLDEKLFIQSLYKVLVSVSEKSSIILYIRDAEKIFLQSERLYNLFHKMLEKLSGPVMVIGSQILDSGVDESPATLFPYNIGVKPPEDDCNALQEDNMKIIQFQDNKKHIAEVLAANDIECNDLNSICHADTRVLSKYIEEIVVSAIHYYLMNTTDPEYRNGKLVISSESLSHGLNLFQEGNSSSEDTLKLETSGKKEVPPDNEFEKHIRPEVIPANEIGVTFADIGALDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINISMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMMHWDGLLTKPGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREMILKTLLAKEKTENLDFKDLAIMTEGYSGSDIKHLCTTAAYRPVRELMKQERLKDMEKNKKAAAEQCSEDASDTKGDGEERVITLRPLNMEDMRQAKSQVAASFADEGSMMAELKQWNEVYGEGGSRKKKKLTYFI 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1124 756 SMART AAA_5 478 615 IPR003593 GO:0016887
Prci1g1124 756 ProSitePatterns AAA-protein family signature. 585 604 IPR003960 GO:0005524|GO:0016887
Prci1g1124 756 Pfam ATPase family associated with various cellular activities (AAA) 482 612 IPR003959 GO:0005524|GO:0016887
Prci1g1124 756 Pfam AAA+ lid domain 634 678 IPR041569 -
Prci1g1124 756 MobiDBLite consensus disorder prediction 398 423 - -
Prci1g1124 756 MobiDBLite consensus disorder prediction 186 211 - -
Prci1g1124 756 Gene3D - 614 684 - -
Prci1g1124 756 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 441 616 - -
Prci1g1124 756 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 441 669 IPR027417 -
Prci1g1124 756 Gene3D - 441 613 IPR027417 -
Prci1g1124 756 MobiDBLite consensus disorder prediction 678 698 - -
Prci1g1124 756 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 44 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1124 Prci-Chr1 17846080 17853764 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1124 442 686 Calmodulin-binding Proteins AT3G56690 38.554 2.63e-43 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1124 - - pcin:129318041 1374.38