Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1123 ATGGAGCAGAAATGCGCTTTGTTGTCAGCATTGAGCGTAGGGGTTGGTCTGGGAGTGGGGCTTGGATTGAGTTCAGGGCAGGTGGTTCAGAAATGGGTTGGAAGGAATCGTGAGCTCTCTGGTGAGCAGATTGAGCTGGAGCTTTTGAGGCTGGTGATTGATGGCAAGGAATGCAAGGAAACTTTTGATGAGTTTCCTTACTATTTAAGTAAAAGAACACGTGAGTTATTGACAAATGCTGCATTTGTTCATTTAAAACAACTTCACTTTTCGAAACACACCCGTAACCTGTCACCAGCAAGCAGGGCAATTCTGCTTTCTGGACCTACAGAACTTTACATGCAAAAACTTGCCAAGGCTTTAGCGCAACACTTTGAGTCAAAGTTGCTGCTGCTAGATATCCCTGACTTCTCTTTCAAGGTGGAAAGCAAACATGGATGTGCAAAAAAAGAACCATCTTTTCAAAGGTCCTTATCTGAGGTGACTCTTGAGCGAGTGTCCAGTCTTTTTGGTTCCTTTTCAGTTCTCCCTTCAACTGGAAAAACTAAAGGTCCCTTGAAGAACACAAGTAGCTTGTGTCTTGATGAAAAACTCTTTATACAGTCGCTTTACAAGGTCTTGGTATCTGTCTCAGAAAAAAGTTCCATCATTTTATACATTAGGGATGCTGAGAAGATTTTCCTCCAATCAGAACGGCTGTATAATTTGTTTCATAAAATGCTTGAGAAACTTTCAGGGCCAGTGATGGTAATTGGTTCCCAGATATTAGATTCGGGAGTTGATGAAAGTCCCGCAACATTATTTCCTTACAACATTGGGGTTAAACCACCAGAAGATGATTGCAACGCCCTACAAGAAGATAATATGAAAATAATTCAGTTTCAAGATAACAAAAAACACATTGCTGAAGTACTTGCAGCCAATGATATTGAATGTAATGACTTGAATTCAATCTGCCATGCAGACACAAGGGTACTAAGTAAATATATTGAAGAAATTGTGGTATCTGCAATACATTACTACTTGATGAATACCACGGATCCAGAATACCGAAATGGGAAGCTAGTAATATCATCCGAGAGTTTGTCCCATGGTTTGAATCTATTTCAAGAAGGCAATAGTAGCTCTGAGGACACCCTGAAGCTGGAGACCAGTGGAAAAAAGGAAGTTCCTCCTGACAATGAGTTTGAGAAGCACATTAGACCAGAGGTCATCCCTGCAAATGAGATCGGAGTTACATTTGCAGATATTGGTGCATTAGATGAAATTAAAGAGTCACTCCAAGAGCTGGTCATGCTTCCTCTTCGAAGGCCAGATCTCTTCAAAGGTGGTCTTCTTAAACCTTGTAGGGGTATACTGCTCTTTGGACCTCCAGGTACTGGAAAAACAATGCTTGCAAAGGCAATTGCAAATGAAGCTGGAGCAAGCTTTATCAATATCTCAATGTCTACCATCACTTCAAAATGGTTTGGAGAAGACGAGAAAAATGTCCGAGCTCTGTTCACATTGGCAGCAAAGGTAGCCCCAACTATTATTTTTGTTGATGAGGTTGATAGCATGCTTGGGCAGCGAACAAGAGTTGGAGAACATGAGGCGATGAGGAAGATTAAAAATGAATTCATGATGCACTGGGATGGTCTATTGACAAAACCTGGGGAGCAAATTCTAGTCCTTGCTGCAACCAACAGGCCATTTGACCTTGATGAAGCAATCATACGACGGTTTGAGCGAAGAATCATGGTTGGCCTTCCATCTGTTGAGAACAGGGAAATGATCTTGAAGACTCTACTAGCTAAGGAAAAGACTGAAAATTTAGACTTCAAAGATCTTGCAATCATGACAGAAGGATACAGTGGAAGTGATATTAAGCATTTGTGCACAACTGCTGCTTATCGACCTGTTAGGGAGCTCATGAAGCAGGAGAGATTAAAAGATATGGAAAAGAATAAAAAAGCTGCTGCAGAACAATGCTCAGAGGATGCATCAGATACTAAGGGGGATGGAGAAGAGCGAGTAATTACCTTGAGGCCTTTAAACATGGAAGACATGAGACAGGCTAAGAGTCAGGGTACAATAAGAATACTACACTCTCATGCCATTAGCCGTGGTGGAAGGTTTGTGTGCCATGGCCAACAATGCCAGACTTCATATTTTCACTTGTTCTTTTACCCCCTTTTTTACTTGGAATCAATTCCTTTTAGTTTAAATTTACTTCCTAAATTTATTTTACAAAGTTTTTTGGGTTCAAATGGATATTGTTTTACTTGA 2268 0.4078 MEQKCALLSALSVGVGLGVGLGLSSGQVVQKWVGRNRELSGEQIELELLRLVIDGKECKETFDEFPYYLSKRTRELLTNAAFVHLKQLHFSKHTRNLSPASRAILLSGPTELYMQKLAKALAQHFESKLLLLDIPDFSFKVESKHGCAKKEPSFQRSLSEVTLERVSSLFGSFSVLPSTGKTKGPLKNTSSLCLDEKLFIQSLYKVLVSVSEKSSIILYIRDAEKIFLQSERLYNLFHKMLEKLSGPVMVIGSQILDSGVDESPATLFPYNIGVKPPEDDCNALQEDNMKIIQFQDNKKHIAEVLAANDIECNDLNSICHADTRVLSKYIEEIVVSAIHYYLMNTTDPEYRNGKLVISSESLSHGLNLFQEGNSSSEDTLKLETSGKKEVPPDNEFEKHIRPEVIPANEIGVTFADIGALDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINISMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMMHWDGLLTKPGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREMILKTLLAKEKTENLDFKDLAIMTEGYSGSDIKHLCTTAAYRPVRELMKQERLKDMEKNKKAAAEQCSEDASDTKGDGEERVITLRPLNMEDMRQAKSQGTIRILHSHAISRGGRFVCHGQQCQTSYFHLFFYPLFYLESIPFSLNLLPKFILQSFLGSNGYCFT 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1123 755 Gene3D - 411 583 IPR027417 -
Prci1g1123 755 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 411 586 - -
Prci1g1123 755 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 44 689 - -
Prci1g1123 755 ProSitePatterns AAA-protein family signature. 555 574 IPR003960 GO:0005524|GO:0016887
Prci1g1123 755 Pfam AAA+ lid domain 604 648 IPR041569 -
Prci1g1123 755 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 411 638 IPR027417 -
Prci1g1123 755 Gene3D - 584 654 - -
Prci1g1123 755 SMART AAA_5 448 585 IPR003593 GO:0016887
Prci1g1123 755 Pfam ATPase family associated with various cellular activities (AAA) 452 582 IPR003959 GO:0005524|GO:0016887
Prci1g1123 755 MobiDBLite consensus disorder prediction 368 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1123 Prci-Chr1 17843598 17853770 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1123 412 656 Calmodulin-binding Proteins AT3G56690 38.554 2.60e-43 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1123 - - pcin:129318041 1439.09