Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1122 ATGGAGCAGAAATGCGCTTTGTTGTCAGCATTGAGCGTAGGGGTTGGTCTGGGAGTGGGGCTTGGATTGAGTTCAGGGCAGGTGGTTCAGAAATGGGTTGGAAGGAATCGTGAGCTCTCTGGTGAGCAGATTGAGCTGGAGCTTTTGAGGCTGGTGATTGATGGCAAGGAATGCAAGGAAACTTTTGATGAGTTTCCTTACTATTTAAGTAAAAGAACACGTGAGTTATTGACAAATGCTGCATTTGTTCATTTAAAACAACTTCACTTTTCGAAACACACCCGTAACCTGTCACCAGCAAGCAGGGCAATTCTGCTTTCTGGACCTACAGAACTTTACATGCAAAAACTTGCCAAGGCTTTAGCGCAACACTTTGAGTCAAAGTTGCTGCTGCTAGATATCCCTGACTTCTCTTTCAAGGTGGAAAGCAAACATGGATGTGCAAAAAAAGAACCATCTTTTCAAAGGTCCTTATCTGAGGTGACTCTTGAGCGAGTGTCCAGTCTTTTTGGTTCCTTTTCAGTTCTCCCTTCAACTGGAAAAACTAAAGGCATTTTACGCGCACACAGTAATAGTACTGGAAGTTCCAATGCATCTCCAAAACTTAGTAGCAATGCCTCTACTGCATCTGATATGAGTAGTCCCTTGAAGAACACAAGTAGCTTGTGTCTTGATGAAAAACTCTTTATACAGTCGCTTTACAAGGTCTTGGTATCTGTCTCAGAAAAAAGTTCCATCATTTTATACATTAGGGATGCTGAGAAGATTTTCCTCCAATCAGAACGGCTGTATAATTTGTTTCATAAAATGCTTGAGAAACTTTCAGGGCCAGTGATGGTAATTGGTTCCCAGATATTAGATTCGGGAGTTGATGAAAGTCCCGCAACATTATTTCCTTACAACATTGGGGTTAAACCACCAGAAGATGATTGCAACGCCCTACAAGAAGATAATATGAAAATAATTCAGTTTCAAGATAACAAAAAACACATTGCTGAAGTACTTGCAGCCAATGATATTGAATGTAATGACTTGAATTCAATCTGCCATGCAGACACAAGGGTACTAAGTAAATATATTGAAGAAATTGTGGTATCTGCAATACATTACTACTTGATGAATACCACGGATCCAGAATACCGAAATGGGAAGCTAGTAATATCATCCGAGAGTTTGTCCCATGGTTTGAATCTATTTCAAGAAGGCAATAGTAGCTCTGAGGACACCCTGAAGCTGGAGACCAGTGGAAAAAAGGAAGTTCCTCCTGACAATGAGTTTGAGAAGCACATTAGACCAGAGGTCATCCCTGCAAATGAGATCGGAGTTACATTTGCAGATATTGGTGCATTAGATGAAATTAAAGAGTCACTCCAAGAGCTGGTCATGCTTCCTCTTCGAAGGCCAGATCTCTTCAAAGGTGGTCTTCTTAAACCTTGTAGGGGTATACTGCTCTTTGGACCTCCAGGTACTGGAAAAACAATGCTTGCAAAGGCAATTGCAAATGAAGCTGGAGCAAGCTTTATCAATATCTCAATGTCTACCATCACTTCAAAATGGTTTGGAGAAGACGAGAAAAATGTCCGAGCTCTGTTCACATTGGCAGCAAAGGTAGCCCCAACTATTATTTTTGTTGATGAGGTTGATAGCATGCTTGGGCAGCGAACAAGAGTTGGAGAACATGAGGCGATGAGGAAGATTAAAAATGAATTCATGATGCACTGGGATGGTCTATTGACAAAACCTGGGGAGCAAATTCTAGTCCTTGCTGCAACCAACAGGCCATTTGACCTTGATGAAGCAATCATACGACGGTTTGAGCGAAGAATCATGGTTGGCCTTCCATCTGTTGAGAACAGGGAAATGATCTTGAAGACTCTACTAGCTAAGGAAAAGACTGAAAATTTAGACTTCAAAGATCTTGCAATCATGACAGAAGGATACAGTGGAAGTGATATTAAGCATTTGTGCACAACTGCTGCTTATCGACCTGTTAGGGAGCTCATGAAGCAGGAGAGATTAAAAGATATGAATAAAAAAGCTGCTGCAGAACAATGCTCAGAGGATGCATCAGATACTAAGGGGGATGGAGAAGAGCGAGTAATTACCTTGAGGCCTTTAAACATGGAAGACATGAGACAGGCTAAGAGTCAGGGTACAATAAGAATACTACACTCTCATGCCATTAGCCGTGGTGGAAGGTTTGTGTGCCATGGCCAACAATGCCAGACTTCATATTTTCACTTGTTCTTTTACCCCCTTTTTTACTTGGAATCAATTCCTTTTAGTTTAAATTTACTTCCTAAATTTATTTTACAAAGTTTTTTGGGTTCAAATGGATATTGTTTTACTTGA 2352 0.4082 MEQKCALLSALSVGVGLGVGLGLSSGQVVQKWVGRNRELSGEQIELELLRLVIDGKECKETFDEFPYYLSKRTRELLTNAAFVHLKQLHFSKHTRNLSPASRAILLSGPTELYMQKLAKALAQHFESKLLLLDIPDFSFKVESKHGCAKKEPSFQRSLSEVTLERVSSLFGSFSVLPSTGKTKGILRAHSNSTGSSNASPKLSSNASTASDMSSPLKNTSSLCLDEKLFIQSLYKVLVSVSEKSSIILYIRDAEKIFLQSERLYNLFHKMLEKLSGPVMVIGSQILDSGVDESPATLFPYNIGVKPPEDDCNALQEDNMKIIQFQDNKKHIAEVLAANDIECNDLNSICHADTRVLSKYIEEIVVSAIHYYLMNTTDPEYRNGKLVISSESLSHGLNLFQEGNSSSEDTLKLETSGKKEVPPDNEFEKHIRPEVIPANEIGVTFADIGALDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINISMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMMHWDGLLTKPGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREMILKTLLAKEKTENLDFKDLAIMTEGYSGSDIKHLCTTAAYRPVRELMKQERLKDMNKKAAAEQCSEDASDTKGDGEERVITLRPLNMEDMRQAKSQGTIRILHSHAISRGGRFVCHGQQCQTSYFHLFFYPLFYLESIPFSLNLLPKFILQSFLGSNGYCFT 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1122 783 Gene3D - 441 613 IPR027417 -
Prci1g1122 783 MobiDBLite consensus disorder prediction 186 211 - -
Prci1g1122 783 Gene3D - 614 683 - -
Prci1g1122 783 Pfam ATPase family associated with various cellular activities (AAA) 482 612 IPR003959 GO:0005524|GO:0016887
Prci1g1122 783 SMART AAA_5 478 615 IPR003593 GO:0016887
Prci1g1122 783 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 44 717 - -
Prci1g1122 783 MobiDBLite consensus disorder prediction 398 424 - -
Prci1g1122 783 ProSitePatterns AAA-protein family signature. 585 604 IPR003960 GO:0005524|GO:0016887
Prci1g1122 783 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 441 616 - -
Prci1g1122 783 Pfam AAA+ lid domain 634 677 IPR041569 -
Prci1g1122 783 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 441 669 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1122 Prci-Chr1 17843598 17853771 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1122 442 684 Calmodulin-binding Proteins AT3G56690 38.866 1.92e-44 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1122 - - pcin:129318041 1497.64