Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1116 ATGGCTACTTCTTCTCGTTCTTGTTGTTGCTGGTGGGTCTTGATTTTTTTGGTGATAGCTGGTTTTCATAATAGTGTTAGAGCAAGCCATATTGGTTTGGGCATGAGACTAGTGGCTAGCAAAGGTGAGGCATGGATTTCAGATAATGGCACGTTCGCGTTTGGGTTCACTTCTTCAGGAACTTATGTTAATGATGATGATAAGTTGTTTCTGCTTGCTATCTGGTTTGCCAAGCTTCCCGGAGATCCAACTTTGGTCTGGTCACCTAACAGAGATTCTCCCGCATCTCGAAATGCTATCTTGGAGCTCAACATGGCCGGGAACCTCGTTCTCTCTGATGGAAATGTCACTCTCTGGGCCTCAAACACCTCTGGCACTGGCGTACATTCAGCATCCATGGAGGAATCCGGCAACTTTGTCCTCTATATGTCCTCCTCCGCCGTCAGCCGCCCTGTCTGGCAGAGCTTCTCACAGCCATCCGACACTCTCCTACCAAACCAACCCATAACTGTCTCGTCGGAACTAACATCCTCAAAATCTGCTTCTCATGGTGGCTTCTACGCCCTCAAAATGCTTCAACAAACCACTTCTTTAAGCCTTGGCCTCACTTACATGCTCCCAGATTCAGAATCTTACACCAATTATTCCTACTGGCAAGGCCCAGATATCTCCAATGTCACAGGGAATGTCACAGCAATTTTAGATCAAGCGGGAAGCTTCGGGATTGTCTATGGAGATTCTTCAAATGGGGCCGTTTATATTTATAAAAATGGAAACGATGACTTGGGGTTATTTTATTCCTCTCACCAAACAACCCCATTCAGCATTTTTAGAAGACTGACACTAGAGAAGAATGGAAATCTGCATTTGTATCGTTGGGACGATGATGTGAATGGGTCAAGACAGTGGGTATCAGAGTGGGCTGCCGTATCAAACCCTTGTGATATTGCTGGAATTTGTGGTAATGGGATTTGTAAATTAGATAGAAGTAAGACTAGTGCATCTTGTACTTGCTTGCCTGGGACTTCTCAAGTTGGAAGGGATGGCCTTTGCTATGAGAATTCTTCACTAGTTGGAAAATGCAATCCCCAACATGAAAACAAGAACCAAACCCAAACATCAGAGTTTGAGATTTCTGTAGTGCAACAGACAAATTATTATTTTTCTGAAATGTCTGTGGTAGCTAACTACAGTGATGTTGCTACTTTGTCAAAATGTGGGGATGCCTGCTTATCAGATTGTGATTGTGTTGCTTCAGTTTATGGTTTAACTGAAGAAACACCATATTGTTGGGTATTAAAGAACTTGGATTTTGGAGGGTTTGAGGACACTAGTGCAACCTTATTTGTGAAGGTCAGGTCAAATGGCTCAGTGAACCCAGAAGGTAAAGCTAGAGGATCTACCAATAATTCTGATGGTGAAGTTAAAGAGAAGGTTTTGGTCCTTCCAATTGTTCTTAGTATGACACTTCTTATTGCCCTTTTATGTTTACTGCTATACTATAATGTTCACCGAAAAAGAACATTAAAAAGGGAGATGGAAAGTTCTTTGATCTTATCAGGTGCTCCTATGAACTTCTCCTATCGTGATTTGCAAATCAGGACTTCTAACTTCACGCAGTTGCTAGGAACAGGTGGATTCGGAAGTGTGTACAAAGGAAGTCTTGGAGATGGGACACTAGTGGCAGTAAAGAAACTTGATAGGGTTTTGCCTCATGGAGAAAAGGAATTCATCACTGAAGTAAACACCATTGGCTCGATGCACCACATGAACTTGGTTCGATTATATGGCTATTGCTCAGAGGGATCACATCGGCTACTAGTGTATGAGTTCATGAAAAATGGGTCTTTGGACAAATGGATCTTTCTTTCGTATCAAGGAAAAGATAGGTTGCTAGATTGGCAAACTCGGTTTGATATAGCTATTGCTACTGCACAAGGGATTGCATACTTTCATGAGCAGTGCAGGAACCGAATTATACATTGTGATATAAAGCCAGAAAATATTCTGTTGGATGAGAATTTTTGTCCTAAAGTATCTGATTTTGGATTGGCAAAACTGATGGGAAGGGAGCATTCTCATGTGGTAACAATGGTGAGAGGGACTAGAGGTTATTTAGCACCAGAATGGGTTAGCAATCGCCCAATAACAGTAAAAGCTGATGTTTATAGTTATGGAATGCTTCTGCTAGAGATTATTGGTGGCCGAAGAAATCTTGACATGTCCTTTGATGCAGAGGACTTCTTTTATCCTGGTTGGGCTTATAAGGCACTGACAAATGGGACATCAATAAAAGTAGCAGATAGGAGATTGAATGGGGCAGTTGATGAAGAGGAGCTGACAAGAGCTCTGAGAGTTGCATTTTGGTGCATCCAAGATGAGGTTTTCACGAGACCAACAATGGGAGAAGTGGTGAGGATGCTGGAAGGGTCCATTAGCATCAACACACCACCAATGCCACAAACAATAACAGAATTGATTGAAGAAGGCTTAGAGCAAGTGTATAGAGCTATGAAGAGAGAGTATAATAATCATTACAGCTCATTCACCTTGACTAGCCATCCTTCTTCTCATGCTACTTGTAGCAATTCCACAATGTCACCAAGATAG 2610 0.4218 MATSSRSCCCWWVLIFLVIAGFHNSVRASHIGLGMRLVASKGEAWISDNGTFAFGFTSSGTYVNDDDKLFLLAIWFAKLPGDPTLVWSPNRDSPASRNAILELNMAGNLVLSDGNVTLWASNTSGTGVHSASMEESGNFVLYMSSSAVSRPVWQSFSQPSDTLLPNQPITVSSELTSSKSASHGGFYALKMLQQTTSLSLGLTYMLPDSESYTNYSYWQGPDISNVTGNVTAILDQAGSFGIVYGDSSNGAVYIYKNGNDDLGLFYSSHQTTPFSIFRRLTLEKNGNLHLYRWDDDVNGSRQWVSEWAAVSNPCDIAGICGNGICKLDRSKTSASCTCLPGTSQVGRDGLCYENSSLVGKCNPQHENKNQTQTSEFEISVVQQTNYYFSEMSVVANYSDVATLSKCGDACLSDCDCVASVYGLTEETPYCWVLKNLDFGGFEDTSATLFVKVRSNGSVNPEGKARGSTNNSDGEVKEKVLVLPIVLSMTLLIALLCLLLYYNVHRKRTLKREMESSLILSGAPMNFSYRDLQIRTSNFTQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFITEVNTIGSMHHMNLVRLYGYCSEGSHRLLVYEFMKNGSLDKWIFLSYQGKDRLLDWQTRFDIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSHVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIIGGRRNLDMSFDAEDFFYPGWAYKALTNGTSIKVADRRLNGAVDEEELTRALRVAFWCIQDEVFTRPTMGEVVRMLEGSISINTPPMPQTITELIEEGLEQVYRAMKREYNNHYSSFTLTSHPSSHATCSNSTMSPR 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1116 869 Gene3D Transferase(Phosphotransferase) domain 1 612 826 - -
Prci1g1116 869 PANTHER OS07G0415500 PROTEIN 8 820 - -
Prci1g1116 869 Gene3D Phosphorylase Kinase; domain 1 500 611 - -
Prci1g1116 869 FunFam S-receptor-like serine/threonine-protein kinase 505 611 - -
Prci1g1116 869 SMART blect_4 36 159 IPR001480 -
Prci1g1116 869 Pfam S-locus glycoprotein domain 264 341 IPR000858 GO:0048544
Prci1g1116 869 FunFam Serine/threonine-protein kinase 32 157 - -
Prci1g1116 869 Pfam D-mannose binding lectin 84 174 IPR001480 -
Prci1g1116 869 ProSitePatterns Serine/Threonine protein kinases active-site signature. 659 671 IPR008271 GO:0004672|GO:0006468
Prci1g1116 869 ProSiteProfiles Bulb-type lectin domain profile. 30 154 IPR001480 -
Prci1g1116 869 ProSiteProfiles Protein kinase domain profile. 536 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1116 869 Pfam Protein kinase domain 539 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1116 869 ProSitePatterns Protein kinases ATP-binding region signature. 542 565 IPR017441 GO:0005524
Prci1g1116 869 CDD STKc_IRAK 542 810 - -
Prci1g1116 869 SUPERFAMILY Protein kinase-like (PK-like) 514 809 IPR011009 -
Prci1g1116 869 CDD B_lectin 40 159 IPR001480 -
Prci1g1116 869 Gene3D - 32 158 IPR036426 -
Prci1g1116 869 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 612 818 - -
Prci1g1116 869 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 239 IPR036426 -
Prci1g1116 869 SMART serkin_6 536 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1116 869 PIRSF SRK 1 863 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1116 Prci-Chr1 17799816 17807195 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1116 486 818 Receptor kinase-like Gene Family AT5G20050 42.778 5.64e-83 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci1g1116 Pkinase 4.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1116 - - aip:107616087 1355.5