Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1101 ATGGAGTATGTTTGGAGAATCTTTTGTGAAGAATCAAGTTGTTCAAAAATGGGGGAGAAACATTGTAGTTATGATTTTGAGCTTCTGAAAGATCCTTCCACATGCTTAAACCATTTGATGATCATTTGTCTTGACGTGTTATTGTTGATTTTGCTTTTATTCACAGTAATACTCAAGTCATCAACAAAGACATTTCATGGTTCTATCCAAGCGAAAAGGTTCTCAAATTTGCAGGTAGCTTCTGCAATAGTAAGCGGCAGTCTTGGGTTAGTTCATTTGTGCTTAGGTGTTTGGGTTTTAGAGGAGAAATTGAGGAAAACTCACACTGCTTTTCCTATCCATTGGTGGATTCAATATTTTTCTCAAGGGATCACATGGTTGTGTGTAGGTTTGACAGTAAGTCTCAAGTTGAGGGAACTTCAAAAACCATGGTCAAGATTAGTGTCTATTTTGATCTTCTTAGTTTCTGGCATTTTTTGTGTTATCTCTATTTTTTTTGTCATTAGTGATAGTGAAGTGACCCTTAAGGTAGCTTTAGATGTTTTATCTTTCCCAGGAGCAATTTTGTTGCTCATCTGCTCATATAAGGGACATGCATACAATGATCAGAATATCAGTGAAAGCCTTTATGCTCCTTTGAATGGTGAGTCTACTGATATTGATAAAACTAGTTCTGCTAATTATGTGACCCCATTTGCAAAAGCTGGATTCTTTAGCAAAGGGTCATTTTGGTGGTTGAATCCATTGATGAAAAGGGGTAAGGAGAAACCTATTCAAGAGGAAGATATCCCAAAATTGCGAGAGGAAGATCAAGCTAAAAGCTGTTATTTGATGTTTCTTGATCAATTGAATAAACAAAAACAGAAAGAACCATCAACACAACCATCTGTCTTGTGGACAATAATTTTCTGCCTCTGGAAAGATATCTTGATATCTGGATTGTTTGCATTGCTTAAAGTACTCACTATTTCAGCTGGTCCACTACTTCTAAATTCCTTCATATTAGTTGCTGAGGGTAAAGAAAGTTTCGAGTATGAAGGTTACATATTGGCCATAACACTTTTCTTTACAAAGATCTTGGAATCAATATCTCAAAGGCAGTGGTACTTCCGAAGCAGATTAATTGGTTTACGAGTTAGATCATTACTTACTGCAGCCATTTATAAAAAGCAATTGAAGCTATCTAATGCTTCAAAGTTGATGCATTCAAGTGGAGAGATTATGAATTATGTAACCGTTGATGCTTATAGAATTGGGGAATTCCCTTTTTGGTGTCACCAGACTTGGACAACGAGTGTTCAACTATGTATTGCACTAGTAATTCTTTTTAACGCTGTGGGGCTAGCAACTATTGCTTCCTTGGTGGTCATAGTGCTCACTGTTCTTTGCAATACTCCACTAGCAAAGCTACAACATAAGTTTCAAACCAAACTTATGGTAGCACAAGATGAGAGATTGAAGGCTAGTTCTGAGGCTCTTATAAATATGAAAGTACTGAAACTCTATGCATGGGAAACCCATTTTAAGAATGCTATCGTAAGATTGAGGAATGTTGAGCTCAAGTGGTTAACTTCTGTGCAGTTAAGAAGGGCATACAATACCTTTCTCTTTTGGTCTTCACCTGTTTTGGTCTCTGCTGCTTCTTTTGGGGCATGTTACTTCCTGAAAGTTCCTTTACATGCAAATAATGTTTTCACTTTTGTGGCAACTTTACGCCTTGTTCAAGATCCAATTAGAACCATCCCAGATGTTATTGGGGTTGTCATTCAAGCTAAAGTAGCATTTGCTCGGATCGTGAAATTCCTCGAGGCACCAGAATTGCAGAGTGTAAGTGTTAGAAAGAAGTGCTCAAGTGGCAGTCTTAATGGTTCCATTTACATCAAGTCAGCTGACTTTTCATGGGAAGATAATGATTCAAAGCCCACTTTAAGAAACATAAATCTAGAGGTTAAACCCAGGCAAAAGGTGGCTATTTGTGGAGAAGTTGGCTCTGGCAAATCAACCTTATTGGCTGCAATTCTTGTAGAAGTTCCCATTACTCATGGAACTATTGAAGTTCATGGGAAGTTTGCTTATGTTTCTCAAACAGCATGGATTCAAACAGGTACATTAAGGGAAAATATACTGTTTGGATCAGCCATGGATCCTCAAAGGTACCAAGAAACACTTGAAAGGTCATCTTTAGTGAAGGATCTTCAATTGTTTCCCTATGGTGATCTCACAGAAATTGGGGAAAGAGGGGTGAACCTTAGTGGAGGCCAAAAACAACGAATTCAACTCGCACGTGCTCTTTATCAGAATGCTGATATATATCTGTTGGATGATCCTTTTAGTGCTGTTGATGCGCATACAGCCACAAATTTGTTTAATGAATATGTCATGGAAGCACTTAGAGAAAAGACAGTCATGCTTGTTACTCATCAAGTTGACTTCCTTCCAGCATTTGATTCTATTTTGCTAATGTGTGATGGGGTGATTCAAGAAGCTGCTCCTTATCAGCATCTTCTATCCTCAAGCCAAGAATTCCAAGACCTCGTCAATGCTCATAAGGAGACTGCTGGATCTGAGAGGCTGCCTGATGTGACTTTTTCTCACACTCATGTAAATCCTACCAAGGAGATTAACAAGTCATTTTCAGAGCAGCAGCTTAATGATTCAAAAGTTGATCAATTAATCAAGCAAGAAGAGAGAGAAATCGGAGACTCGGGATTAAAGCCTTACTTGCAGTATATGAATCAAAACAAGGGCTATTTGTACTTTTGTATTGCTTCACTTATGCACCTTGCATTTGTGATTGGTCAAGTACTACAGAACTCATGGATGGCTGCTAATGTTGACAATCCACATGTTAGCACATTAAGATTGATCTTGGTGTACTTGTTGATCGGAGTTGTTTCAACTGCTTTCTTGCTAATCAGAAGTATGGGAATGGTTGCATTGGGCATTCAATCATCAAAGTCTTTGTTTTCACAACTACTGAACTCTCTTTTTCGTGCGCCTATGTCGTTCTATGATTCCACGCCTTTGGGAAGGATACTTAGTAGGGTCTCTTCAGATTTGAGCATTATTGATTACGATGTCCCCTTCAGCCTTATGTTTGCAGTTGGAGCCACTACAAATTGTTATGCTAATCTTACTGTTTTAGCAGTTGTTACTTGGCAAGTCTTGTTTGTCTCTATACCAATGATTTATATTGCAATTCGTCTACAGAGATACTACTTTGCCTCTGCAAAAGAGTTGATGCGATTGAATGGCACAACAAAATCCTATATAGCTAATCATCTATCAGAATCTGTTGCTGGTGCTATGACAATAAGGGCTTTTGAGGAGGAAGATCGCTTCTTTGCAAAGAATCTTGATTTAATCGATGTCAATGCCTCTCCTTTCTTCCATAATTTTGCAGCAAATGAGTGGTTGATTCAACGTTTAGAAACAGTTAGTGCAGTTGTTCTTTTCTCAGCTGCACTATGCATGGTAGTACTTCCATTTGGGACTTTCTCCTCTGGATTTATTGGCATGGCCATTTCTTATGGCCTTTCATTAAATGCATCCCTCGTATTCTCAATTCAAAACCAGTGCACCATAGCAAACTATATAATATCAGTAGAGAGGTTGAATCAATACATGCATGTACCAAGTGAAGCTCCAGAAGTCATTGAAGGAAATCGCCCTCCAGTGAATTGGCCAACAGTGGGAAAAGTAGAAATAGATAATTTGCAGATAAGATATAGGCATGATGCACCTCTTGTACTCCGAGGGATCACATGCACATTTGAAGGAGGACACAAGATTGGCATTGTTGGCAGGACTGGTAGTGGAAAGTCCACTCTCATTGGTGCTTTGTTTCGTCTTGTGGAGCCAGCTGGCGGAAAGATTATTGTTGACAACATAAATATCTATTCTATTGGACTCCATGATTTAAGATCACGTTTTGGTGTCATACCACAAGATCCCACACTTTTTAATGGCACAGTTAGATATAACTTGGACCCTTTGTCTCAGCATTCTGATCAAGAGATATGGGAGGTTCTTGGAAAGTGTCAATTGCGAGAGGCAGTTCAAGAGAAAAAAGGTGGCTTAGACTCTTCAGTTGTGGAAGATGGATCAAACTGGAGCATGGGACAGAGGCAGCTTTTCTGTTTGGGACGTGCAATTCTTAGGAGAAGTCGGATTTTGGTGCTTGACGAAGCGACTGCATCAATTGATAACGCTACTGATTTGATTTTGCAAAAAACTATAAGGAGTGAGTTTGCAGATTGCACTGTCATCACTGTAGCTCACAGGATTCCAACAGTGATGGATTGCACTAAAGTTCTATCCATTAGTGATGGAAAGTTGGTGGAATATGATGAGCCAATGAAGTTAATGAAGAGGGAAGACTCTTTGTTTGGGCAGCTTGTGAAGGAATATTGGTCTCATCTTCAATCTGCAGAATCATGTTAA 4443 0.3892 MEYVWRIFCEESSCSKMGEKHCSYDFELLKDPSTCLNHLMIICLDVLLLILLLFTVILKSSTKTFHGSIQAKRFSNLQVASAIVSGSLGLVHLCLGVWVLEEKLRKTHTAFPIHWWIQYFSQGITWLCVGLTVSLKLRELQKPWSRLVSILIFLVSGIFCVISIFFVISDSEVTLKVALDVLSFPGAILLLICSYKGHAYNDQNISESLYAPLNGESTDIDKTSSANYVTPFAKAGFFSKGSFWWLNPLMKRGKEKPIQEEDIPKLREEDQAKSCYLMFLDQLNKQKQKEPSTQPSVLWTIIFCLWKDILISGLFALLKVLTISAGPLLLNSFILVAEGKESFEYEGYILAITLFFTKILESISQRQWYFRSRLIGLRVRSLLTAAIYKKQLKLSNASKLMHSSGEIMNYVTVDAYRIGEFPFWCHQTWTTSVQLCIALVILFNAVGLATIASLVVIVLTVLCNTPLAKLQHKFQTKLMVAQDERLKASSEALINMKVLKLYAWETHFKNAIVRLRNVELKWLTSVQLRRAYNTFLFWSSPVLVSAASFGACYFLKVPLHANNVFTFVATLRLVQDPIRTIPDVIGVVIQAKVAFARIVKFLEAPELQSVSVRKKCSSGSLNGSIYIKSADFSWEDNDSKPTLRNINLEVKPRQKVAICGEVGSGKSTLLAAILVEVPITHGTIEVHGKFAYVSQTAWIQTGTLRENILFGSAMDPQRYQETLERSSLVKDLQLFPYGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFNEYVMEALREKTVMLVTHQVDFLPAFDSILLMCDGVIQEAAPYQHLLSSSQEFQDLVNAHKETAGSERLPDVTFSHTHVNPTKEINKSFSEQQLNDSKVDQLIKQEEREIGDSGLKPYLQYMNQNKGYLYFCIASLMHLAFVIGQVLQNSWMAANVDNPHVSTLRLILVYLLIGVVSTAFLLIRSMGMVALGIQSSKSLFSQLLNSLFRAPMSFYDSTPLGRILSRVSSDLSIIDYDVPFSLMFAVGATTNCYANLTVLAVVTWQVLFVSIPMIYIAIRLQRYYFASAKELMRLNGTTKSYIANHLSESVAGAMTIRAFEEEDRFFAKNLDLIDVNASPFFHNFAANEWLIQRLETVSAVVLFSAALCMVVLPFGTFSSGFIGMAISYGLSLNASLVFSIQNQCTIANYIISVERLNQYMHVPSEAPEVIEGNRPPVNWPTVGKVEIDNLQIRYRHDAPLVLRGITCTFEGGHKIGIVGRTGSGKSTLIGALFRLVEPAGGKIIVDNINIYSIGLHDLRSRFGVIPQDPTLFNGTVRYNLDPLSQHSDQEIWEVLGKCQLREAVQEKKGGLDSSVVEDGSNWSMGQRQLFCLGRAILRRSRILVLDEATASIDNATDLILQKTIRSEFADCTVITVAHRIPTVMDCTKVLSISDGKLVEYDEPMKLMKREDSLFGQLVKEYWSHLQSAESC 1480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1101 1480 SUPERFAMILY ABC transporter transmembrane region 909 1214 IPR036640 GO:0005524|GO:0016020
Prci1g1101 1480 FunFam ABC transporter C family member 3 1217 1469 - -
Prci1g1101 1480 SMART AAA_5 1260 1452 IPR003593 GO:0016887
Prci1g1101 1480 SMART AAA_5 652 825 IPR003593 GO:0016887
Prci1g1101 1480 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1234 1468 IPR003439 GO:0005524
Prci1g1101 1480 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 627 848 IPR003439 GO:0005524
Prci1g1101 1480 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 928 1197 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci1g1101 1480 Pfam ABC transporter 643 777 IPR003439 GO:0005524
Prci1g1101 1480 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 232 1468 - -
Prci1g1101 1480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1224 1465 IPR027417 -
Prci1g1101 1480 CDD ABC_6TM_ABCC_D2 920 1209 IPR044726 GO:0140359
Prci1g1101 1480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 620 848 IPR027417 -
Prci1g1101 1480 Gene3D - 1218 1469 IPR027417 -
Prci1g1101 1480 FunFam ABC transporter C family member 10 293 606 - -
Prci1g1101 1480 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 310 590 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci1g1101 1480 SUPERFAMILY ABC transporter transmembrane region 298 603 IPR036640 GO:0005524|GO:0016020
Prci1g1101 1480 FunFam ABC transporter C family member 5 883 1215 - -
Prci1g1101 1480 FunFam ABC transporter C family member 10 608 861 - -
Prci1g1101 1480 CDD ABCC_MRP_domain1 625 824 - -
Prci1g1101 1480 Pfam ABC transporter 1251 1399 IPR003439 GO:0005524
Prci1g1101 1480 Gene3D - 623 855 IPR027417 -
Prci1g1101 1480 CDD ABC_6TM_ABCC_D1 311 598 IPR044746 GO:0140359
Prci1g1101 1480 ProSitePatterns ABC transporters family signature. 750 764 IPR017871 GO:0005524|GO:0016887
Prci1g1101 1480 Pfam ABC transporter transmembrane region 310 575 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci1g1101 1480 Pfam ABC transporter transmembrane region 928 1158 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci1g1101 1480 CDD ABCC_MRP_domain2 1232 1452 - -
Prci1g1101 1480 Gene3D ABC transporter type 1, transmembrane domain 281 607 IPR036640 GO:0005524|GO:0016020
Prci1g1101 1480 Gene3D ABC transporter type 1, transmembrane domain 882 1215 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1101 Prci-Chr1 17366763 17379504 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1101 611 840 Calmodulin-binding Proteins AT2G36910 28.685 5.49e-22 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1101 K05666 - gmx:100811468 2329.67