Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1091 ATGCATTCGCTCTATCCGCGTTTCTTGTGGGCCCATTTCTTTTTCTTTATCATCTTCAATTTTCCCCCACTTTCTTCTGTCCCTTTCTTGCCCTCACAAAACGTAACCCTCTTTGGTGACGCCTATTTCGGAAATAACGCCATTAGTCTCACCCAAGATCTCAGTTGCCACCATTCTTCTTCTCCTTCCTCCTCTTCTGGGGTTGGAAGAGCTTTCTATGTAAACCCGGTTCGGTTTCTTGATTCTGAGACGAACTCTACGGCTTCTTTCTCTTGTCGCTTCACTTTTTCAATCGTCTCCTCGCCTTCGTGTCATTCTGGCGATGGCATTGCCTTCATGATCATCTCCGACACCGACTTGGTCAGCTTCTCTCGTGGGTATATGGGTCTCCCATCTCTATCTGCAAATCAGCAAGATTCTTATTTTGCCGTGGAATTTGACACCAATTTTGACCCTCCACTGGGTGACATTAATGGGAATCACATTGGTATCGACGTTGATACAATCATATCTATCGCCTCAGTGGATGCTATCTCTGAAGGAATTGATCTGAAGAGTGGGAGAAAAATTACAGCTTGGATTGAGTACAGAGATGCCCAGAAAATTGTTCGCGTATGGGTGGGTCATTCTCCAGATCGGCCTCCAACCCCTATTTTGATTGCTCAAATTGACCTCTCTGAGAAACTTAAGGAGTTTATGCATGTTGGTTTCTCTGCGTCCAATGTGATGGGCTCAGGTATTCATATTATCGACCGTTGGCAATTCAAAACTTTTGGGTTTATTAGTTCAATGAATTCTATGGATATGGTAGAAGAAGGAGACTGTTTCTTTTGTCATCCAGAGACTTCTACCATAGCTACTCAACAGATTGATAGTGCTCACTATGGAAGAGAGAAGCTAGAGGAGATGGCTCTTAGGCTGGGAGGCATCGCTGCATTTATTGTCTCTGCATTATTAATCTGCATATTCTTGTCAAAGAGAAGAAAGGGAAGTGATGGAAATCCTCTGAGAGAAGACCAACATTGTGAATTCCAAACCACAAATCTACCCTCAAGACTGTCACTCTCTGAAATCAACTCAGCCACGATGGGATTTAGTAGAGACAGACTTGTTGGGGAAGGAACATCAGCAAAAGTCTATAAAGGGTCTCTTCCATATGGAGGAGATGTTGCTGTGAAAAGATTTGGCAAGGTTAATAATGGCAGTGAAAGTATGGATTATGTGCACAATCCTTTCACCACTGAGTTTGCCACCATGGCAGGTTGCTTAAGGCACAAGAACTTGGTTCAGCTTCAAGGATGGTGTTGTGAAGGGTCTGAGTTAGTACTTGTCTATGAGTACCTACCCAATGGTAGCCTCAACAGAATCCTGCACAAGAACTACAATTCTTCATTGGTTCTTTCATGGAAGCAAAGGGTGAACATAATTCTGGGGGTTGCTTCTGCCCTTACCTATCTTCATGAAGAATGTGAGAGGCAAATCATTCACCGAGATGTAAAGACCTGCAATATAATGCTCGATGCAGATTTCAATGCCAAGCTTGGGGACTTTGGCCTAGCTGAAGTCTATGAGCATAGTTGTGACACAAGAGAAGCTACTTTACCTGCGGGAACAATGGGGTACCTTGCACCTGAATATGTATATTCTGGTGTTCCAACTGTCAAGACTGATGTGTACAGCTTCGGCGTAGTGGTGCTAGAAGTGGCTACTGGGAGGAAACCAGTGGATGATGATGGAACTGTGGTTGTAGATTACGTGTGGAAGATGTGGGAAAGAAGAAAGCTGGTTGAAGCAGGAGACCCAAGGTTGATAGGGAAGTTTGATGTGAGAGAGATGGAGAGGATGCTCATGGTGGGGCTTTTATGTGTTCACCCGGACCACGAGAACCGGCCAAGAGTGAGAGATGCAGCTAGGATTCTCAAGGGAGAAGCACCGGTTCCATTGTTACCTGCAAGTAAACCAAGGGTGAGACTTAGGCCTGTTTTACCAAATGATACTGAGGAAACATTGGATGTTATTGGAAACAGACCCAGTACTGATGAGGCTCCGTATTTGACCCCTAGGAGCCACTTTAACTAA 2079 0.4449 MHSLYPRFLWAHFFFFIIFNFPPLSSVPFLPSQNVTLFGDAYFGNNAISLTQDLSCHHSSSPSSSSGVGRAFYVNPVRFLDSETNSTASFSCRFTFSIVSSPSCHSGDGIAFMIISDTDLVSFSRGYMGLPSLSANQQDSYFAVEFDTNFDPPLGDINGNHIGIDVDTIISIASVDAISEGIDLKSGRKITAWIEYRDAQKIVRVWVGHSPDRPPTPILIAQIDLSEKLKEFMHVGFSASNVMGSGIHIIDRWQFKTFGFISSMNSMDMVEEGDCFFCHPETSTIATQQIDSAHYGREKLEEMALRLGGIAAFIVSALLICIFLSKRRKGSDGNPLREDQHCEFQTTNLPSRLSLSEINSATMGFSRDRLVGEGTSAKVYKGSLPYGGDVAVKRFGKVNNGSESMDYVHNPFTTEFATMAGCLRHKNLVQLQGWCCEGSELVLVYEYLPNGSLNRILHKNYNSSLVLSWKQRVNIILGVASALTYLHEECERQIIHRDVKTCNIMLDADFNAKLGDFGLAEVYEHSCDTREATLPAGTMGYLAPEYVYSGVPTVKTDVYSFGVVVLEVATGRKPVDDDGTVVVDYVWKMWERRKLVEAGDPRLIGKFDVREMERMLMVGLLCVHPDHENRPRVRDAARILKGEAPVPLLPASKPRVRLRPVLPNDTEETLDVIGNRPSTDEAPYLTPRSHFN 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1091 692 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Prci1g1091 692 SMART serkin_6 365 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1091 692 FunFam L-type lectin-domain containing receptor kinase VIII.1 448 658 - -
Prci1g1091 692 Pfam Legume lectin domain 31 258 IPR001220 GO:0030246
Prci1g1091 692 Gene3D - 17 269 - -
Prci1g1091 692 FunFam L-type lectin-domain containing receptor kinase S.6 329 447 - -
Prci1g1091 692 PANTHER - 56 650 - -
Prci1g1091 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672|GO:0006468
Prci1g1091 692 Gene3D Phosphorylase Kinase; domain 1 331 447 - -
Prci1g1091 692 CDD lectin_legume_LecRK_Arcelin_ConA 32 259 IPR001220 GO:0030246
Prci1g1091 692 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 257 IPR013320 -
Prci1g1091 692 ProSiteProfiles Protein kinase domain profile. 365 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g1091 692 SUPERFAMILY Protein kinase-like (PK-like) 345 640 IPR011009 -
Prci1g1091 692 CDD STKc_IRAK 371 642 - -
Prci1g1091 692 Gene3D Transferase(Phosphotransferase) domain 1 448 645 - -
Prci1g1091 692 Pfam Protein kinase domain 366 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1091 Prci-Chr1 17066013 17068501 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1091 12 692 Receptor kinase-like Gene Family AT5G42120 54.701 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Prci1g1091 Pkinase 1.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1091 - - qsa:O6P43_008119 956.051