Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1074 ATGGATGATACTTCCCCTCCAGTGGTTTCTAATGGAAGTTTCTTGAGAGAATATGATAAAGAGGTGATGAAGAAGAGAAAAGAGAATGTGGAGTTTGCTATTACAGAACCTGATGTGGACGATGACATTACAGGAGACAAGGAAGCTCATATGGCCAGTTTGCATGCTCGTTACATGAAGACCCTCATTCAGAGGACCACTCACCATTTCGGTTACCCATATAATTTAGACTTCGACTATGGAAGGGTAGAGCAATTGCAAGATTTCTTGATCAACAATCTTGGGGACCCATTTATAGAAAGCAACTATGGTGTACACTCGAGAGCCTTCGAAGTTGGTGTACTAGATTGGTTTGCTCGTCTATGGGAAATCAACAAGGATGAATATTGGGGTTACACTACAAATTGTGGAACCGAAGGCAATCTTCATGGAATTTTAGTCGGGAGAGAAGTGTTTCCAGATGGAGTTCTATATGCCTCAAATGACTCAGATTACTCCGTTTTCAAAGCAGCAAGAATGTATAGAATAGACTGTGTCAAAGTTGCCACTTTGGTTTCTGGTGAGATTGATTGTGCAGATTTAAAGTCTAAATTGCTTGCTAATAAGCAGAAGCCGGCCATCATCAACCTAAACATAGGAACAACTGTGAAAGGAGCTATTGACGACGTAGATCAAGTTATAAAAGCTCTTGAAGAAAGTGGTTATACCTCTGATCGATTCTACATTCACTGTGACGGAGCGTTACTTGGACTAATGGTTCCTTTTCTAAAAAGTGCACCGAAAGTAACCTTCAAGAAGCCAATAGGAAGCATAAGTGTTTCAGGGCATAAATTTGTGGGTTGCCCTATTCCTTGTGGGGTACAAATAACACGTTTGTGTCACATACAGGTCCTATCACAGAACGTAGAATATCTTGCTTCAAGAGACGCAACTATCATGGGAAGCAGAAACAGCCATGCACCCATATTCCTTTGGTACACACTCAACAAGAAGGGATTCAAAGGGTTCCAAAAAGAGGCTCAAGAGTGCCTCAAAAACGCCCTTTACTTGAAGGAGTGCCTGAAGAAGTCTGGGATTAGCGTGCTACTGAATCGCCATAGCAATATTGTTGTGTTCGAGAGGCCTCAAGATGAGGAGTTTGTTCGAGTCTGGCAGCTCGCGTGCCAATGGAATGTGGCTAATGTGGTGGTGATGCCAAATCTTACGGCTGAGAAATTGAATGCTTTTGTGAGTGAGCTTGTTGTGAAACGCAGTGGTTGGTATGAGGATGGGAAAATGAAGTCTCCTTGTGTTGAGAATGATGTTGGTAAGGAGAATTCTTTGTGTGATTTGCATGAGGAATGTTATGAGTGA 1353 0.4213 MDDTSPPVVSNGSFLREYDKEVMKKRKENVEFAITEPDVDDDITGDKEAHMASLHARYMKTLIQRTTHHFGYPYNLDFDYGRVEQLQDFLINNLGDPFIESNYGVHSRAFEVGVLDWFARLWEINKDEYWGYTTNCGTEGNLHGILVGREVFPDGVLYASNDSDYSVFKAARMYRIDCVKVATLVSGEIDCADLKSKLLANKQKPAIINLNIGTTVKGAIDDVDQVIKALEESGYTSDRFYIHCDGALLGLMVPFLKSAPKVTFKKPIGSISVSGHKFVGCPIPCGVQITRLCHIQVLSQNVEYLASRDATIMGSRNSHAPIFLWYTLNKKGFKGFQKEAQECLKNALYLKECLKKSGISVLLNRHSNIVVFERPQDEEFVRVWQLACQWNVANVVVMPNLTAEKLNAFVSELVVKRSGWYEDGKMKSPCVENDVGKENSLCDLHEECYE 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1074 450 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 270 291 IPR021115 GO:0016831
Prci1g1074 450 PANTHER - 15 446 - -
Prci1g1074 450 Gene3D Aspartate Aminotransferase, domain 1 329 418 IPR015422 GO:0003824
Prci1g1074 450 SUPERFAMILY PLP-dependent transferases 49 413 IPR015424 -
Prci1g1074 450 Gene3D - 83 328 IPR015421 GO:0003824
Prci1g1074 450 Pfam Pyridoxal-dependent decarboxylase conserved domain 156 372 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1074 Prci-Chr1 16114397 16120173 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1074 212 357 Calmodulin-binding Proteins AT1G65960 29.677 2.61e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1074 K25193 - vvi:100258141 679.093