Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1072 ATGGATGATACTTCCCCTCCAGTGGTTTCTAATGGAAGTTTCTTGAGAGAATATGATAAAGAGGTGATGAAGAAGAGAAAAGAGAATGTGGAGTTTGCTATTACAGAACCTGATGTGGACGATGACATTACAGGAGACAAGGAAGCTCATATGGCCAGTTTGCATGCTCGTTACATGAAGACCCTCATTCAGAGGACCACTCACCATTTCGGTTACCCATATAATTTAGACTTCGACTATGGAAGGGTAGAGCAATTGCAAGATTTCTTGATCAACAATCTTGGGGACCCATTTATAGAAAGCAACTATGGTGTACACTCGAGAGCCTTCGAAGTTGGTGTACTAGATTGGTTTGCTCGTCTATGGGAAATCAACAAGGATGAATATTGGGGTTACACTACAAATTGTGGAACCGAAGGCAATCTTCATGGAATTTTAGTCGGGAGAGAAGTGTTTCCAGATGGAGTTCTATATGCCTCAAATGACTCAGATTACTCCGTTTTCAAAGCAGCAAGAATGTATAGAATAGACTGTGTCAAAGTTGCCACTTTGGTTTCTGGAACAACTGTGAAAGGAGCTATTGACGACGTAGATCAAGTTATAAAAGCTCTTGAAGAAAGTGGTTATACCTCTGATCGATTCTACATTCACTGTGACGGAGCGTTACTTGGACTAATGGTTCCTTTTCTAAAAAGTGCACCGAAAGTAACCTTCAAGAAGCCAATAGGAAGCATAAGTGTTTCAGGGCATAAATTTGTGGGTTGCCCTATTCCTTGTGGGGTACAAATAACACGTTTGTGTCACATACAGGTCCTATCACAGAACGTAGAATATCTTGCTTCAAGAGACGCAACTATCATGGGAAGCAGAAACAGCCATGCACCCATATTCCTTTGGTACACACTCAACAAGAAGGGATTCAAAGGGTTCCAAAAAGAGGCTCAAGAGTGCCTCAAAAACGCCCTTTACTTGAAGGAGTGCCTGAAGAAGTCTGGGATTAGCGTGCTACTGAATCGCCATAGCAATATTGTTGTGTTCGAGAGGCCTCAAGATGAGGAGTTTGTTCGAGTCTGGCAGCTCGCGTGCCAATGGAATGTGGCTAATGTGGTGGTGATGCCAAATCTTACGGCTGAGAAATTGAATGCTTTTGTGAGTGAGCTTGTTGTGAAACGCAGTGGTTGGTATGAGGATGGGAAAATGAAGTCTCCTTGTGTTGAGAATGATGTTGGTAAGGAGAATTCTTTGTGTGATTTGCATGAGGAATGTTATGAGTGA 1275 0.4235 MDDTSPPVVSNGSFLREYDKEVMKKRKENVEFAITEPDVDDDITGDKEAHMASLHARYMKTLIQRTTHHFGYPYNLDFDYGRVEQLQDFLINNLGDPFIESNYGVHSRAFEVGVLDWFARLWEINKDEYWGYTTNCGTEGNLHGILVGREVFPDGVLYASNDSDYSVFKAARMYRIDCVKVATLVSGTTVKGAIDDVDQVIKALEESGYTSDRFYIHCDGALLGLMVPFLKSAPKVTFKKPIGSISVSGHKFVGCPIPCGVQITRLCHIQVLSQNVEYLASRDATIMGSRNSHAPIFLWYTLNKKGFKGFQKEAQECLKNALYLKECLKKSGISVLLNRHSNIVVFERPQDEEFVRVWQLACQWNVANVVVMPNLTAEKLNAFVSELVVKRSGWYEDGKMKSPCVENDVGKENSLCDLHEECYE 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1072 424 Gene3D Aspartate Aminotransferase, domain 1 303 392 IPR015422 GO:0003824
Prci1g1072 424 PANTHER - 15 420 - -
Prci1g1072 424 Pfam Pyridoxal-dependent decarboxylase conserved domain 185 346 IPR002129 GO:0016830|GO:0019752|GO:0030170
Prci1g1072 424 SUPERFAMILY PLP-dependent transferases 49 387 IPR015424 -
Prci1g1072 424 Gene3D - 184 302 IPR015421 GO:0003824
Prci1g1072 424 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 244 265 IPR021115 GO:0016831
Prci1g1072 424 Gene3D - 83 183 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1072 Prci-Chr1 16114397 16120173 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1072 169 331 Calmodulin-binding Proteins AT1G65960 30.233 1.55e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1072 K25193 - nnu:104599869 622.468