Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1069 ATGGACCCATTCAAGCCGATGTCATCAAGCAACCCACCACCGGCGCCGGTGTCCACCAGGGAAGTTGGGCAGGGCTCAGGGACTGCCCAACCTCAGCCCCACCACAGTGGGTCCCCCTCAATTACCGGCTACACTGACCTGGCTCGTTTCGATCCGTTTGAGATTGACTTCATCGACAGCCCTCCTCCACCAATTCCGGGTGTTCCAAACGACCCCACTGCACCACCGGTGATGGAGTCGAACATCGATGCTGGTTTTTCAACAGAGGAACTCAACAACTACCTTAGCTCCGACAACAACATGCCATTGAGGTCACCCGGCGGCGACGATCTCCGGAGCTTGTCTATGGATTCTGATTTCCTGGACTACATTGCTGACGTCGAAGGCTTTCCCAGAGCCGTCGAGGATATTGCCGGCAGCAACGATGCTGTTCCGGAAATACCTGTGCAGCATCAGGTTCAGAGTGTTTGCATGGGTGGTTCTGATAATGTGACCATTGAGGCTGAGCCGTCCTCCGTGGCCAATGAAATGATGAAGAAAGTTATGCCTCCTGAGAAGCTCGCTGAACTAGCTGTGGTTGATCCCAAGCGAGCAAAGAGGATTCTTGCTAATAGGGAATCTGCTGCTCGTTCAAAGGAGAAGAGGACTCGTTACACAATGGAGCTGGAGGAGAAGGCGCAGACACTTCAAGCTCAATCAGCTAAGGTCTCTGCCCAGCTTGCGAAGCTTGAGAAGGAAAATTCGGACTTGAAAGCTCAGAACAAGGATATTAATTGTGAGACAGTGACTATTGAAGCGGAAACAAAGCTTAGACGAGAACTTAATGAATCTTTAAGGGCTCAGCTGACGCAACTTAAGAAAGAACATAGACGGAAAACTGCATTTAAGAGCAAAAATTTTCAGGGACTGCTCTCTCAGTTTTCTTCTCAGTTAGCATTGTTTCAGGTGACTCATCTTCGATCCTGGCAGGCTCAGCAGCATCAACAACAGCTTGGCATGCCTTCGTCTCACTTGGACAAGCCCAATAATGAGCAAGTTGATTCAGATGATGACTCGAATTAA 1062 0.4991 MDPFKPMSSSNPPPAPVSTREVGQGSGTAQPQPHHSGSPSITGYTDLARFDPFEIDFIDSPPPPIPGVPNDPTAPPVMESNIDAGFSTEELNNYLSSDNNMPLRSPGGDDLRSLSMDSDFLDYIADVEGFPRAVEDIAGSNDAVPEIPVQHQVQSVCMGGSDNVTIEAEPSSVANEMMKKVMPPEKLAELAVVDPKRAKRILANRESAARSKEKRTRYTMELEEKAQTLQAQSAKVSAQLAKLEKENSDLKAQNKDINCETVTIEAETKLRRELNESLRAQLTQLKKEHRRKTAFKSKNFQGLLSQFSSQLALFQVTHLRSWQAQQHQQQLGMPSSHLDKPNNEQVDSDDDSN 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1069 353 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 11 337 - -
Prci1g1069 353 MobiDBLite consensus disorder prediction 57 73 - -
Prci1g1069 353 SUPERFAMILY Leucine zipper domain 196 252 IPR046347 GO:0003700|GO:0006355
Prci1g1069 353 Gene3D - 195 262 - -
Prci1g1069 353 SMART brlzneu 192 256 IPR004827 GO:0003700|GO:0006355
Prci1g1069 353 MobiDBLite consensus disorder prediction 1 81 - -
Prci1g1069 353 MobiDBLite consensus disorder prediction 14 43 - -
Prci1g1069 353 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 194 257 IPR004827 GO:0003700|GO:0006355
Prci1g1069 353 Pfam bZIP transcription factor 196 255 IPR004827 GO:0003700|GO:0006355
Prci1g1069 353 CDD bZIP_plant_RF2 197 247 IPR044759 GO:0003700|GO:0006355
Prci1g1069 353 MobiDBLite consensus disorder prediction 325 341 - -
Prci1g1069 353 Coils Coil 219 260 - -
Prci1g1069 353 MobiDBLite consensus disorder prediction 325 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1069 Prci-Chr1 15881753 15886328 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1069 108 286 bZIP Transcription Factor Family AT1G43700 41.081 5.59e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci1g1069 bZIP_1 4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1069 K20557 - gmx:778142 177.563