Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1062 ATGAAAGGTTCATCACTAAGTTGCAGTGTTGTTCTGCAGAAAAACAAGCCCTATATAGCAATGATCTTCATACAGTTTGTGTATGCAGGCATGGCTTTGCTCTCTAAAGCTGCGATCTCCAAGGGAATGAACCCTTATGTGTTTGTTGTCTATAGGCAAGCCTTTGCTTCAATTGCTTTATCACCCTTTGCTTTCTTTGACAGTAAGCAGGCTACTTCCTTGTCATACACCTTGCTTTGGAAAATCTTTTTCATTTCCTTATTTGGGTTAACACTGAGCTCAAGCCTTTACTATGTTTCAATCAACTATACAACTGCAACTTTTGCTGCTGCATCCACCAACACTGTTCCTGCAATTACTTTCATCATGGCTGTTATATTAAGAGTGGAAAGCATATCCATAAAACACATGTACGGGGTGTCAAAGATTCTAGGTTCTGTTCTGAGCCTTTCTGGGGCAATCGTATTTGCTTTAGTGAAAGGACCTCCTCTAGAATTCATGAAGTTTTATGCTCAGAATCAGGAGAATCATCACTCATCAATGTCACTAACAAAAGGTCACTCAAAAATGGATTTGATCAAAGGTCCTGTCATGATGCTTTCTGCAAACACTGCATGGTCTTTATGGCTTATATTGCAAGGTTTCATTGTAAAACAATACACTGCGAAGTTTCGGCTCACCAATCTGCAATGTTTCTTCAGCTTCATACAGTCTGCTGTTTTAGCTGTTGCACTTGAGAGAGATCCTTCAGCATGGAAGCTCGGATGGGACATAAATCTTCTCTCTGTGGCCTACTGTGGTTTAATTGTGACAGGGATTTGTTATTGGCTCCAAGTGTGCACTATAGAGACTAAAGGACCCGTTTTTACAGCAATGTTTACCCCTCTGGCTCTTATCATCACAGCAATATTCTCAGCTCTTTTGTGGAAGGAATCACTTTACTGGGGAAGTGTTGGAGGAGCAGTGTTGTTGGTGGGTGGACTGTACAGTGTATTGTGGGGGAAGAACAGAGAGTGTCCCAAGCAAGAAAGCCACCATCAAGACGAAGAGCACACAACAACTCATTCCAAATTAGAGGATACCACATTGGAATGCATTATTCAGCACTAA 1110 0.4135 MKGSSLSCSVVLQKNKPYIAMIFIQFVYAGMALLSKAAISKGMNPYVFVVYRQAFASIALSPFAFFDSKQATSLSYTLLWKIFFISLFGLTLSSSLYYVSINYTTATFAAASTNTVPAITFIMAVILRVESISIKHMYGVSKILGSVLSLSGAIVFALVKGPPLEFMKFYAQNQENHHSSMSLTKGHSKMDLIKGPVMMLSANTAWSLWLILQGFIVKQYTAKFRLTNLQCFFSFIQSAVLAVALERDPSAWKLGWDINLLSVAYCGLIVTGICYWLQVCTIETKGPVFTAMFTPLALIITAIFSALLWKESLYWGSVGGAVLLVGGLYSVLWGKNRECPKQESHHQDEEHTTTHSKLEDTTLECIIQH 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1062 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 150 - -
Prci1g1062 369 PANTHER WAT1-RELATED PROTEIN 16 344 IPR030184 GO:0016020|GO:0022857
Prci1g1062 369 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020
Prci1g1062 369 Pfam EamA-like transporter family 16 150 IPR000620 GO:0016020
Prci1g1062 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1062 Prci-Chr1 15739784 15745262 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1062 7 338 Nodulin-like Gene Family AT5G07050 37.500 8.91e-85 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1062 - - pcin:129304003 702.59