Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1061 ATGAAAGGTTCATCACTAAGTTGCAGTGTTGTTCTGCAGAAAAACAAGCCCTATATAGCAATGATCTTCATACAGTTTGTGTATGCAGGCATGGCTTTGCTCTCTAAAGCTGCGATCTCCAAGGGAATGAACCCTTATGTGTTTGTTGTCTATAGGCAAGCCTTTGCTTCAATTGCTTTATCACCCTTTGCTTTCTTTGACAGTAAGCAGGCTACTTCCTTGTCATACACCTTGCTTTGGAAAATCTTTTTCATTTCCTTATTTGGGTTAACACTGAGCTCAAGCCTTTACTATGTTTCAATCAACTATACAACTGCAACTTTTGCTGCTGCATCCACCAACACTGTTCCTGCAATTACTTTCATCATGGCTGTTATATTAAGAGTGGAAAGCATATCCATAAAACACATGTACGGGGTGTCAAAGATTCTAGGTTCTGTTCTGAGCCTTTCTGGGGCAATCGTATTTGCTTTAGTGAAAGGACCTCCTCTAGAATTCATGAAGTTTTATGCTCAGAATCAGGAGAATCATCACTCATCAATGTCACTAACAAAAGGTCACTCAAAAATGGATTTGATCAAAGGTCCTGTCATGATGCTTTCTGCAAACACTGCATGGTCTTTATGGCTTATATTGCAAGGTTTCATTGTAAAACAATACACTGCGAAGTTTCGGCTCACCAATCTGCAATGTTTCTTCAGCTTCATACAGTCTGCTGTTTTAGCTGTTGCACTTGAGAGAGATCCTTCAGCATGGAAGCTCGGATGGGACATAAATCTTCTCTCTGTGGCCTACTGTGGTTTAATTGTGACAGGGATTTGTTATTGGCTCCAAGTGTGCACTATAGAGACTAAAGGACCCGTTTTTACAGCAATGTTTACCCCTCTGGCTCTTATCATCACAGCAATATTCTCAGCTCTTTTGTGGAAGGAATCACTTTACTGGGGAAGAACTTTGATGAGGATCACAAACCTAAGAAGGGCAAATTGCTTTCTGCTGGTATTTTTGTTTTGGGCCACTTGTAGTGTTGGAGGAGCAGTGTTGTTGGTGGGTGGACTGTACAGTGTATTGTGGGGGAAGAACAGAGAGTGTCCCAAGCAAGAAAGCCACCATCAAGACGAAGAGCACACAACAACTCATTCCAAATTAGAGGATACCACATTGGAATGCATTATTCAGCACTAA 1185 0.4127 MKGSSLSCSVVLQKNKPYIAMIFIQFVYAGMALLSKAAISKGMNPYVFVVYRQAFASIALSPFAFFDSKQATSLSYTLLWKIFFISLFGLTLSSSLYYVSINYTTATFAAASTNTVPAITFIMAVILRVESISIKHMYGVSKILGSVLSLSGAIVFALVKGPPLEFMKFYAQNQENHHSSMSLTKGHSKMDLIKGPVMMLSANTAWSLWLILQGFIVKQYTAKFRLTNLQCFFSFIQSAVLAVALERDPSAWKLGWDINLLSVAYCGLIVTGICYWLQVCTIETKGPVFTAMFTPLALIITAIFSALLWKESLYWGRTLMRITNLRRANCFLLVFLFWATCSVGGAVLLVGGLYSVLWGKNRECPKQESHHQDEEHTTTHSKLEDTTLECIIQH 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1061 394 PANTHER WAT1-RELATED PROTEIN 16 369 IPR030184 GO:0016020|GO:0022857
Prci1g1061 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 150 - -
Prci1g1061 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 317 - -
Prci1g1061 394 Pfam EamA-like transporter family 16 150 IPR000620 GO:0016020
Prci1g1061 394 Pfam EamA-like transporter family 194 317 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1061 Prci-Chr1 15739784 15745262 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1061 7 363 Nodulin-like Gene Family AT5G07050 34.903 7.92e-79 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1061 - - pcin:129304003 772.696