Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1052 ATGGAAGGAAATATGTCACAAGGAGGTATAGTTCCGGCAGGGGCTTCTTCTTTTGGGGGTTTTGATATTCCAACATTTTCTCATCAATCACAGCATCCCCAATCAAGTCATCACCATCAAACTCATCCACACCAAGGGCATTCGCCTATTCATGAAGGCTTTCCGCTGTCAATGGGAACCTTACATAGCTGTGATCAAACCATTTCATTGACAGATTTTAACAGGGGAGATAGAAGTAAAGGCTCAGCAAGTGAGGAGGACGAGCGAAGCTTTATTGAAGATGGAAGAGGAAAAAAGGGCTCACCTTGGCACCGTGTTAAGTGGACTGATAATATGGTGAAGCTACTGATTACAGCTGTTTCATATTTAAGCGAGGACGTAAGTAGTGATTTTGGTGGCGGAGGAAGAAGAAAATTTGCAGTCCTACAGAAAAAGGGCAAGTGGAAATGTATCTCCAAGGTCATGGCTGAAAGAGGTTTTCATGTTTCTCCTCAGCAGTGTGAGGATAAATTTAATGATCTTAATAAGAGGTATAAAAAGCTTAATGATATGCTTGGGAGGGGAACTTCTTGTCAGGTTGTTGAGAACCCTGCACTTTTGGATGAAATAGATTTTCTTTCTGAGAAAGAAAAGGATGATGTTCGGAAAATATTAAGCTCGAAACAGCTCTTCTATGAAGAGATGTGTTCATATCATAATTGTAATAGATTGGCTTTACCCCATGATCCAGCATTGCGGTGCTCACTGCAACTGGCTCTTAAAAATAGAGATGACCATGATAATGATGATGTCAGAAGCTCCTACCATGATGATAATGATGAAGATGATCTGGATTTGGAAAATGATGATGACGACGACTTTCATGAGGATTATGCTTGTCATGGAGGTAACAGAGGGACACATGGGACATTGGGGGGATCTATGAAGAAATTGAAACAGAGCCAAGAAGATCTTATGTTTGTGAATCCCTCCAATTCTAGGGCCTACAATAAAAGTTCTTATCCACATGGAATGATGGTCCAATCTGATGTGAATCAAGGTTTACCTGAAAGCAAGAAAGCCACATGGTTACAAGAGCAATGGATTGAATCTCGATCAATTCAATTAGAAGAACAGAAGATGCAACTTCAGGTTGAGTTGTTGGAACTAGAGAAACAGAGATTGAAGTGGCAGAGGTTTTGTAAGAAAAAAGACCGAGATTTGGAAAAAATGAGAATGGAAAATGAGAGGATGAAGCTTGAAAATGAACGTATGGCTTTGGAGTTGAAGCGAAAGAAAATGGAAAGTGGCTTTAACTAG 1299 0.4018 MEGNMSQGGIVPAGASSFGGFDIPTFSHQSQHPQSSHHHQTHPHQGHSPIHEGFPLSMGTLHSCDQTISLTDFNRGDRSKGSASEEDERSFIEDGRGKKGSPWHRVKWTDNMVKLLITAVSYLSEDVSSDFGGGGRRKFAVLQKKGKWKCISKVMAERGFHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPALLDEIDFLSEKEKDDVRKILSSKQLFYEEMCSYHNCNRLALPHDPALRCSLQLALKNRDDHDNDDVRSSYHDDNDEDDLDLENDDDDDFHEDYACHGGNRGTHGTLGGSMKKLKQSQEDLMFVNPSNSRAYNKSSYPHGMMVQSDVNQGLPESKKATWLQEQWIESRSIQLEEQKMQLQVELLELEKQRLKWQRFCKKKDRDLEKMRMENERMKLENERMALELKRKKMESGFN 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1052 432 MobiDBLite consensus disorder prediction 71 103 - -
Prci1g1052 432 PANTHER F16F4.11 PROTEIN-RELATED 1 429 - -
Prci1g1052 432 MobiDBLite consensus disorder prediction 258 272 - -
Prci1g1052 432 Gene3D - 108 180 - -
Prci1g1052 432 Coils Coil 366 391 - -
Prci1g1052 432 MobiDBLite consensus disorder prediction 258 308 - -
Prci1g1052 432 MobiDBLite consensus disorder prediction 78 103 - -
Prci1g1052 432 Coils Coil 394 430 - -
Prci1g1052 432 Pfam Myb/SANT-like DNA-binding domain 105 231 IPR044822 -
Prci1g1052 432 MobiDBLite consensus disorder prediction 273 287 - -
Prci1g1052 432 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1052 Prci-Chr1 15555049 15559379 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci1g1052 Myb_DNA-bind_4 2.4e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1052 - - gmx:100816474 587.415