Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1051 ATGCTGGGCGACTCATCGTCGGCTGTTTTGGGCGGTGGAGGAGGAGGAGGAAGTGGTGGCGGTGGCGGCGTTGGTAACTCTTATGGTGCAGTGGCGCCGACGATGGCGGTCGTCGCTGCAGCGGCAGGAACGTCTTCCCTTGATGGTGGCGAATCGACAGCGGCAGCGGCAGCGGCGGCAGCGGCTGGATCGAATTCGGGAGAGGAAGATGTGAGGGGAAGAGGGGAAGAAGGTGACCGGAGCTTCGGCGGCAACCGGTGGCCCCGGCAAGAGACTTTGGCGCTCTTGAAAATACGCTCAGATATGGACGTGGCGTTTCGAGATGCTAGCGTTAAAGGTCCTCTCTGGGAAGATGTTTCCAGGAAGATGGCAGAGCTTGGGTATCACAGAAGCGCCAAGAAATGCAAAGAGAAATTCGAGAACGTGTACAAGTATCACAAGAGAACAAAAGATGGACGAACTGGGAAATCTGATGGCAAAACGTATCGTTTTTTCGATCAATTAGAAGCTCTTGATCATAATCAAAACCATCCTCCTCCTCCTTCTCTTACAGTTCAATCCTCATCTCAGCCGCCACAAGTTCCGCCGCCGTCGTTATTAGCCATACCTGCAACTCCGGTTTCAGTGGTGGCGACGACTCCATTATCGTCCACAAATGTTAATCCTCATCATCGTTTCTCTACTGTTCCATTAACGATGATTACAACTCAATCCAATAATGTTCTCAATCCACCTATCAACCTCACTTCTTCGATCAATAATAATCCTTCTTCTTCCTACAATATTTTCCCACCACCACCGCCACCATTGTCAACATCAGCAGCAAACCCTATCCAATCATCTTGTGCGGCTGAGCTCTTGACCAATTCGCCGTCTTCCTCGACGTCTTCTGACGAATCGATAGAGCGGCGGCAACGGCGGAAGCGGAAGTGGAAGGACTTCTTCGGGAGGTTGACGAAGGAGGTGATAGAGAAGCAGGAGGAAATGCAGAAGAGGTTTTTGGAAGCCATTGAGAAGCGAGAACACGAGAGGATGGTTCGTGAAGAAGCTTGGAGAATGCAAGAGATGGCGAGGATTAATCGCGAGAGGGAAATATTGGCTCAAGAAAGATCTATAGCAGCTGCCAAAGATGCTGCTGTAATGGCATTATTGCAGAAGATCGCCGAACAGCAAAATCTTGGACTTCCATTGAATAATATCAACATGCCTAATCCTCCTCCGCCGCCACCGGCGGCACAACCGGCACCAGCACCAGTTCCGGCTCCTCCACCCGCTCTGCGGCAGCCGGGTTCATTGACAAATATGGAGATTGTGGTATCTCATAACAACAACGACAATAACAATGGGGAGAATAATTTAATGACACCCAGCTCATCGAGGTGGCCGAAAGTTGAGGTTCAGGCATTGATAAACCTACGAACGAATATGGACGAGAAGTACCAAGAGAATGGGCCAAAAGGGCCGTTGTGGGAGGAGATCTCGGCGGCGATGCGGCGGCTCGGGTACAACCGGAATGCCAAGAGGTGTAAGGAGAAGTGGGAGAACATAAACAAGTACTTCAAGAAGGTGAAGGAAAGCAACAAGAAAAGGCCCGAAGATTCCAAGACCTGTCCGTATTTTCAACAGCTAGATGCTCTATACAGGGAGAAGAACAACAAGCTTGAGATGATCACTACTCCTCCGTCGTCTGCCGCTGCGGCCACCGCTATTCATAATCTGAATCCAAAGAATAATAGCACAATACCAATGTCGTCAGCGCCGCCCCTGATGGTGCAGCCGGAGCAGCAATGGCCTCCGCAGCAATTAGGGACAGCGAGGGAGAACAACAACAACAGCAACAACGCAGAGCTATTGGAGGAGGAGGAAGAAGAAGAAGACATGGACGAAGAGAAGGATATTGAAGACGAAGATGAAGAAGAAGAGGAAGAAGAAGAAGATGAAGGAGGTGGTAATTATGAGATAGTAGCGAGCAAGCCAGCTTCAGTGAGTGCAGGCAGCTGA 2001 0.5037 MLGDSSSAVLGGGGGGGSGGGGGVGNSYGAVAPTMAVVAAAAGTSSLDGGESTAAAAAAAAAGSNSGEEDVRGRGEEGDRSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWEDVSRKMAELGYHRSAKKCKEKFENVYKYHKRTKDGRTGKSDGKTYRFFDQLEALDHNQNHPPPPSLTVQSSSQPPQVPPPSLLAIPATPVSVVATTPLSSTNVNPHHRFSTVPLTMITTQSNNVLNPPINLTSSINNNPSSSYNIFPPPPPPLSTSAANPIQSSCAAELLTNSPSSSTSSDESIERRQRRKRKWKDFFGRLTKEVIEKQEEMQKRFLEAIEKREHERMVREEAWRMQEMARINREREILAQERSIAAAKDAAVMALLQKIAEQQNLGLPLNNINMPNPPPPPPAAQPAPAPVPAPPPALRQPGSLTNMEIVVSHNNNDNNNGENNLMTPSSSRWPKVEVQALINLRTNMDEKYQENGPKGPLWEEISAAMRRLGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFQQLDALYREKNNKLEMITTPPSSAAAATAIHNLNPKNNSTIPMSSAPPLMVQPEQQWPPQQLGTARENNNNSNNAELLEEEEEEEDMDEEKDIEDEDEEEEEEEEDEGGGNYEIVASKPASVSAGS 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1051 666 MobiDBLite consensus disorder prediction 575 615 - -
Prci1g1051 666 MobiDBLite consensus disorder prediction 400 427 - -
Prci1g1051 666 ProSiteProfiles Myb-like domain profile. 85 143 IPR001005 -
Prci1g1051 666 MobiDBLite consensus disorder prediction 616 650 - -
Prci1g1051 666 MobiDBLite consensus disorder prediction 172 200 - -
Prci1g1051 666 CDD GT1 459 524 - -
Prci1g1051 666 CDD GT1 85 150 - -
Prci1g1051 666 Gene3D - 461 522 - -
Prci1g1051 666 Gene3D - 87 148 - -
Prci1g1051 666 MobiDBLite consensus disorder prediction 287 307 - -
Prci1g1051 666 Coils Coil 605 647 - -
Prci1g1051 666 MobiDBLite consensus disorder prediction 433 460 - -
Prci1g1051 666 FunFam Trihelix transcription factor GT-2 461 522 - -
Prci1g1051 666 SMART sant 457 519 IPR001005 -
Prci1g1051 666 SMART sant 83 145 IPR001005 -
Prci1g1051 666 FunFam Trihelix transcription factor GT-2 87 148 - -
Prci1g1051 666 MobiDBLite consensus disorder prediction 1 26 - -
Prci1g1051 666 MobiDBLite consensus disorder prediction 69 84 - -
Prci1g1051 666 MobiDBLite consensus disorder prediction 575 666 - -
Prci1g1051 666 MobiDBLite consensus disorder prediction 184 200 - -
Prci1g1051 666 PANTHER FI21293P1 51 614 - -
Prci1g1051 666 MobiDBLite consensus disorder prediction 400 460 - -
Prci1g1051 666 ProSiteProfiles Myb-like domain profile. 459 517 IPR001005 -
Prci1g1051 666 Pfam Myb/SANT-like DNA-binding domain 459 546 IPR044822 -
Prci1g1051 666 Pfam Myb/SANT-like DNA-binding domain 85 171 IPR044822 -
Prci1g1051 666 MobiDBLite consensus disorder prediction 59 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1051 Prci-Chr1 15367564 15371186 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1051 83 551 Trihelix Transcription Factor Family AT1G76890 53.782 2.28e-146 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci1g1051 Myb_DNA-bind_4 1.2e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1051 - - pcin:129284603 1000.73