Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g1034 ATGGCGGATCCGTCTTTGAAGCGGAAACGTATGCCGGTGGGATACAGATTCCGTCCGACCGAGCAAGAGCTCGTCGCCTACTACCTTCACCACAGATTGAAGATTGATAATCCATCCATTTACGCCGCCATCCCCGAGATTGACGTTTGCAAGTTCGAACCCTGGGATTTATTAGCTTGGGCTTCAGCGACGTCGGTGACCGAGTTCGATGACTCGGAATGCTATTTCTTCACCCGTTGCGATTATAAGTACTCTAAAAGTACTCGGTTTAACAGGACAACGTCGGCTGGCTTCTGGAAAGTCACCGGCAAAGACAGAAATATTTGTGATCGAGACACCAACAATGTCATTGGGATAAAAAGGATTTTAGTTTTTCATGAAGGACGTTTTTCTCATAAAATAAAGAGCAATTGGGTCATTCATGAATATCATAATATTATGCTTCCATCCAATCAGAGAACTCATGTTCTTTGTAGATTGGAGAAGAAACATGAGAAAAAAATAAAAGAAAAAAATAGTCAAATGAAGGATACCGGTTTGAGGATTCAAATTTCTTCCCAAACACCTTCCCAATCAAATAAAACTACAGACACAATTCAAACACCTTCTCAATCAAACGAAACTATAAACATAACAATTCAAACACCTTCCCAATCAAAAGAAGTTGCAGACAAAGTGATTCAAACACCTTCCCAATCAAACGAAACTACAATTATAGCAACTCAAACACCTTTCCAATCAAATGAAGTTACAGACATAGCAATTCAAACACCTTCTCAATCAAATGAAGCTACTGACATTCTGTTGATACAAATACCTTCTCAATTAATTGAAGCTACAGACACATCAATTGATGTATCTTTTCAATTCAATGAAGATACAGGCATGATTCATACACCGTTTCAGTCAAGTGAAGTTATAGCAATGGCATCTTTTCAAGCAAATGAAATTACAGATCCTATGGATCAATTGTCACCAGAGCTACGGTCAATTATTGAAACATCAATTGACTCGGAAGGGCTAAGATCAATCTTTGGAATTCCGATTAACTTGGAAGAATCTGCATGTAGCTTTCACTGA 1080 0.3861 MADPSLKRKRMPVGYRFRPTEQELVAYYLHHRLKIDNPSIYAAIPEIDVCKFEPWDLLAWASATSVTEFDDSECYFFTRCDYKYSKSTRFNRTTSAGFWKVTGKDRNICDRDTNNVIGIKRILVFHEGRFSHKIKSNWVIHEYHNIMLPSNQRTHVLCRLEKKHEKKIKEKNSQMKDTGLRIQISSQTPSQSNKTTDTIQTPSQSNETINITIQTPSQSKEVADKVIQTPSQSNETTIIATQTPFQSNEVTDIAIQTPSQSNEATDILLIQIPSQLIEATDTSIDVSFQFNEDTGMIHTPFQSSEVIAMASFQANEITDPMDQLSPELRSIIETSIDSEGLRSIFGIPINLEESACSFH 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g1034 359 Gene3D NAC domain 20 169 IPR036093 GO:0003677|GO:0006355
Prci1g1034 359 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 241 - -
Prci1g1034 359 ProSiteProfiles NAC domain profile. 11 163 IPR003441 GO:0003677|GO:0006355
Prci1g1034 359 MobiDBLite consensus disorder prediction 177 206 - -
Prci1g1034 359 Pfam No apical meristem (NAM) protein 12 144 IPR003441 GO:0003677|GO:0006355
Prci1g1034 359 SUPERFAMILY NAC domain 6 163 IPR036093 GO:0003677|GO:0006355
Prci1g1034 359 MobiDBLite consensus disorder prediction 171 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g1034 Prci-Chr1 14256469 14258358 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g1034 6 174 NAC Transcription Factor Family AT3G49530 44.253 4.04e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci1g1034 NAM 3.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g1034 - - pcin:129322017 718.383