Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0995 ATGGATCACACCTTGCAAGCTCTCGTCGCTGCCATCGTTAGCTTCTTCGTTGTCACTCTCATCTTCGCCGCCATCATCCTCGCCTGCAAAAACAACACCAAAACCCATCCACGGCATCGTCAAGCCCCTGCCCAGACCCAGCGGGAGCTTTCCTCCATGGTCGTTGACGGCAGCTGGTCCTTCGACCCCTACGTTCAAATCAACATGGACGAGATCACTAGAGCCACCAAGAATTTCTCGCCCGACCTCATCATCGGCGATGGCAGCTTCGGTCTCGTCTACAAAGCGCGTCTCTCCAACGGCCTTGTTGTTGCCATCAAGAAGCTCTCGCCGGATGCCTTCCAAGGGTTTCGTGAATTCCGAGCTGAGATGGAAACCTTAACTAGGCTCCGGCATCCCAATATCGTCAAAATTCTCGGGTACTGGGCGGCGGGTCCGGAGAGAATGTTGGTCTACGAGTTCATCGAGAAAGGGAATCTCGATCAATGGCTTCACGATCCGACGAACTTTTCGTCTTCTGGATACGACGACGTTTCAATGGCGCGAGCCCCATTGCCGTGGGACCTGAGGTTGAAGATAATCAGAGGCGTTGCCAATGGCCTTTTTTACTTGCATGGGCTGGACAAGCCCATTATTCACAGAGACATCAAAGCTAGTAATGTGTTGCTGGACTCTGACTTTGAGGCCCATATTGCTGATTTTGGGCTCGCGAGGAGAATCGATACTTCAAACTCTCACGTGTCGACTCAGTTCGCCGGAACCATGGGGTACATGCCGCCGGAGTACAGAGATGGGGTTAATGTGGCCAACGTGAAGGTGGATGTCTACAGTTTTGGGGTTTTGATGCTGGAAATAGCAACGGGCCGACGGCCCAATCTGTCTGTGAAGGTTGAGAAGAAGGATATTGGGCTTGTGCAATGGGCCCATAAAATGGTGGCCCAGGACTCCGAAATGGAAATGGTTGATCCTAATATTTCAAGAGAAGGATTAAGGGAAGATAATGTGAAGGAGTACTTTAGGATTGCTTGTATGTGCACAAGTGAACTACAGAAACACAGGCCTGTGATGCAACAGGTTGTGGAACTGTTCGAGAACATGGCCGTGTAA 1107 0.5113 MDHTLQALVAAIVSFFVVTLIFAAIILACKNNTKTHPRHRQAPAQTQRELSSMVVDGSWSFDPYVQINMDEITRATKNFSPDLIIGDGSFGLVYKARLSNGLVVAIKKLSPDAFQGFREFRAEMETLTRLRHPNIVKILGYWAAGPERMLVYEFIEKGNLDQWLHDPTNFSSSGYDDVSMARAPLPWDLRLKIIRGVANGLFYLHGLDKPIIHRDIKASNVLLDSDFEAHIADFGLARRIDTSNSHVSTQFAGTMGYMPPEYRDGVNVANVKVDVYSFGVLMLEIATGRRPNLSVKVEKKDIGLVQWAHKMVAQDSEMEMVDPNISREGLREDNVKEYFRIACMCTSELQKHRPVMQQVVELFENMAV 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0995 368 FunFam Phytosulfokine receptor 2 155 367 - -
Prci1g0995 368 CDD STKc_IRAK 85 366 - -
Prci1g0995 368 ProSiteProfiles Protein kinase domain profile. 79 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0995 368 SMART serkin_6 79 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0995 368 Gene3D Phosphorylase Kinase; domain 1 40 154 - -
Prci1g0995 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Prci1g0995 368 Gene3D Transferase(Phosphotransferase) domain 1 155 367 - -
Prci1g0995 368 SUPERFAMILY Protein kinase-like (PK-like) 60 363 IPR011009 -
Prci1g0995 368 Pfam Protein tyrosine and serine/threonine kinase 85 362 IPR001245 GO:0004672|GO:0006468
Prci1g0995 368 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 365 - -
Prci1g0995 368 FunFam Phytosulfokine receptor 2 40 154 - -
Prci1g0995 368 ProSitePatterns Protein kinases ATP-binding region signature. 85 108 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0995 Prci-Chr1 13153113 13154683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0995 63 366 Receptor kinase-like Gene Family AT5G07280 44.918 1.96e-74 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Prci1g0995 PK_Tyr_Ser-Thr 6.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0995 - - qsa:O6P43_008077 497.664