Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0992 ATGGCATCATCTGCAGTTTCTCTCATTTTCACTTCCTTTCTGCTTCTGGCTTTCTCCATCCATGCCTCTCATCATCATCATCATCACTGCGAACCAGATTCTTCCGCCTGCTCCAACTCCAATAAGCTTCCTTTAGTGAAGGGTCTCTCATGGAGTTTCTACCACTCAAGCTGCCCTAACCTTCAATCTCTCATCAGAAAACACCTCCACAAGGTCTTCTCCGACGACATCGGCCTCGCCGCCGGCTTGCTTCGCCTCCATTTCCATGACTGCTTCGTTCAGGGTTGTGACGGGTCGGTATTGTTGGATGGATCCGCGAGTGGGCCTAGCGAGAAGGAGGCCCCACCGAACCTGAGTTTGAGGGCTGAGGCTTTCAAGGTGATTGAAGAACTCAGATCTCTCGTCCACCGTCACTGTGGAAGCGTCGTCTCTTGCGCCGACATCGCCGCCCTCGCCGCCCGTGACGCCGTTGTTCTGTCTGGAGGACCAGAGTATGAAGTTCCCTTGGGAAGACGAGACGGCCTAACGTTCGCCACAAGAAACGCGACGCTGGAGAACCTCCCGGCGCCGACCAGCAACGCCAGCGTCATTCTCGAGTCACTGGCCACTAAAGGCTTTGACCCGACCGACGTCGTAGCTCTCTCCGGCGGCCACACAATCGGAATCAGTCACTGCGCTTCCTTCACCAACAGGCTCTACCCTAATCAGGACCCTGTGATGGAAGAGACCTTCGCCGACAACCTCAAGCTCACGTGCCCCACCGCGAACACCGACAACACCACCGTGTTGGACATCCGAACACCGAACCTGTTCGACAACAAGTACTACGTTGACCTTGTCAACCGTCAGGGACTCTTCACCTCTGACCAAGACCTGTTCACGGACAAGAGGACGAAGGAGATTGTGAGCGAATTTGCTGAGAACCAAAATCTCTTCTTCGAGAAGTTTGCAGAGGCTATGATGAAGATGGGTCAGCTTGGCGTGTTAACAGGTAATAATGGCGAGATTCGAGGAAATTGCTCTGTGAGGAACCAAGATTATGAGTCTGTCTTGAAGAAGTACAAGGTGGAGGATGTCGTGGAAGACGACTACAAGTCGGAACTGTGA 1107 0.5348 MASSAVSLIFTSFLLLAFSIHASHHHHHHCEPDSSACSNSNKLPLVKGLSWSFYHSSCPNLQSLIRKHLHKVFSDDIGLAAGLLRLHFHDCFVQGCDGSVLLDGSASGPSEKEAPPNLSLRAEAFKVIEELRSLVHRHCGSVVSCADIAALAARDAVVLSGGPEYEVPLGRRDGLTFATRNATLENLPAPTSNASVILESLATKGFDPTDVVALSGGHTIGISHCASFTNRLYPNQDPVMEETFADNLKLTCPTANTDNTTVLDIRTPNLFDNKYYVDLVNRQGLFTSDQDLFTDKRTKEIVSEFAENQNLFFEKFAEAMMKMGQLGVLTGNNGEIRGNCSVRNQDYESVLKKYKVEDVVEDDYKSEL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0992 368 PRINTS Plant peroxidase signature 262 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g0992 368 PRINTS Plant peroxidase signature 123 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g0992 368 PRINTS Plant peroxidase signature 278 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g0992 368 PRINTS Plant peroxidase signature 82 102 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g0992 368 PRINTS Plant peroxidase signature 142 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g0992 368 PRINTS Plant peroxidase signature 209 221 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g0992 368 PRINTS Plant peroxidase signature 318 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g0992 368 PRINTS Plant peroxidase signature 58 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g0992 368 PRINTS Plant peroxidase signature 161 176 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g0992 368 FunFam Peroxidase 52 200 - -
Prci1g0992 368 Pfam Peroxidase 66 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g0992 368 Gene3D - 53 341 - -
Prci1g0992 368 PANTHER PEROXIDASE 25-RELATED 18 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Prci1g0992 368 ProSitePatterns Peroxidases proximal heme-ligand signature. 210 220 IPR019793 -
Prci1g0992 368 ProSitePatterns Peroxidases active site signature. 80 91 IPR019794 GO:0004601
Prci1g0992 368 ProSiteProfiles Plant heme peroxidase family profile. 48 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g0992 368 FunFam Peroxidase 188 323 - -
Prci1g0992 368 CDD secretory_peroxidase 48 342 IPR033905 GO:0004601|GO:0042744
Prci1g0992 368 PRINTS Haem peroxidase superfamily signature 143 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g0992 368 PRINTS Haem peroxidase superfamily signature 80 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g0992 368 PRINTS Haem peroxidase superfamily signature 264 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g0992 368 PRINTS Haem peroxidase superfamily signature 161 173 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g0992 368 PRINTS Haem peroxidase superfamily signature 210 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci1g0992 368 Gene3D Peroxidase, domain 2 189 324 - -
Prci1g0992 368 SUPERFAMILY Heme-dependent peroxidases 44 346 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0992 Prci-Chr1 13036015 13037820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0992 32 353 Peroxidase AT1G71695 64.087 9.62e-158 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0992 K00430 - mof:131162895 497.278