Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0958 ATGTCCAAGATGTCGGCATCTCAAAAGGAAACAAATAAATTGTTTATGTCGATCAGGGAAGGAGAGAGAAAGCCATTTGACCTTTTACGTACTGTACGTGATGGGTGCATTGCTGGAGGTGCTGCTGGTGTTGTTGTAGAAACAGCCTTGTATCCAATTGATACTATAAAAACTCGACTTCAGGCTGCCCGTGGTGGAGGGAAAATCATTTTGAAGGGTCTATATTCTGGATTGGCTGGAAATCTTGCTGGTGTCTTACCAGCTTCTGCAATTTTTGTTGGTGTATATGAACCCACAAAATTGAAACTGCTAGATTCCCTGCCTGAAAATCTCAGCGCTGTTGCTCATTTTGCTGCAGGTGCCATTGGTGGTTTGGCTTCTTCTCTTGTTCGTGTTCCAACTGAGGTTGTTAAGCAAAGAATGCAAACTGGACAGTTTACTTCAGCTTCTGCTGCTGTCCGTCTCATTGTTGCCAAGGAGGGTTTCAAAGGTCTCTATGCGGGATATGGATCCTTCCTATTGCGAGATTTGCCATTTGATGCCATACAATTTTGCATATATGAGCAGCTTCGGATAGGATATAAGTTAGCGGCCAAAAGAGATCTGAATGATCCAGAGAATGCTATGCTTGGTGCTTTTGCTGGTGCTGTAACTGGAGCAGTTACAACTCCTCTGGATGTTGTAAAAACCAGATTGATGGTTCAGGGATCACAAAGCCATTACAAAGGCATTAGTGATTGTGTGAGAACCATAATCAAAGAAGAAGGAACTCAAGCTCTTTTCAAGGGCATGGGGCCTAGAATTTTGTGGATAGGCATTGGAGGTTCAATTTTCTTTGGTGTTCTTGAGAAGACAAAGCAAATTCTTGCTCAAAGGCACCAGCAAGATGAGGCCAAGAGGCCAATATCTTCTGTAGCCCCAAGATGA 927 0.4337 MSKMSASQKETNKLFMSIREGERKPFDLLRTVRDGCIAGGAAGVVVETALYPIDTIKTRLQAARGGGKIILKGLYSGLAGNLAGVLPASAIFVGVYEPTKLKLLDSLPENLSAVAHFAAGAIGGLASSLVRVPTEVVKQRMQTGQFTSASAAVRLIVAKEGFKGLYAGYGSFLLRDLPFDAIQFCIYEQLRIGYKLAAKRDLNDPENAMLGAFAGAVTGAVTTPLDVVKTRLMVQGSQSHYKGISDCVRTIIKEEGTQALFKGMGPRILWIGIGGSIFFGVLEKTKQILAQRHQQDEAKRPISSVAPR 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0958 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 206 288 IPR018108 -
Prci1g0958 308 Pfam Mitochondrial carrier protein 206 291 IPR018108 -
Prci1g0958 308 Pfam Mitochondrial carrier protein 111 191 IPR018108 -
Prci1g0958 308 Pfam Mitochondrial carrier protein 36 104 IPR018108 -
Prci1g0958 308 SUPERFAMILY Mitochondrial carrier 36 283 IPR023395 -
Prci1g0958 308 Gene3D Mitochondrial carrier domain 30 303 IPR023395 -
Prci1g0958 308 PRINTS Mitochondrial carrier protein signature 48 62 IPR002067 GO:0055085
Prci1g0958 308 PRINTS Mitochondrial carrier protein signature 166 184 IPR002067 GO:0055085
Prci1g0958 308 PRINTS Mitochondrial carrier protein signature 35 48 IPR002067 GO:0055085
Prci1g0958 308 PRINTS Mitochondrial carrier protein signature 211 233 IPR002067 GO:0055085
Prci1g0958 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 111 193 IPR018108 -
Prci1g0958 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 30 102 IPR018108 -
Prci1g0958 308 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 8 298 - -
Prci1g0958 308 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 34 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0958 Prci-Chr1 12255152 12262896 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0958 86 291 Chloroplast and Mitochondria Gene Families AT1G07030 28.311 1.38e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0958 K15111 - gmx:100800051 467.233