Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0949 ATGACTCCTTGCAAGAATAAGGTTGTGTTCATAATGGGATCAACGGGCACAGGAAAAACCAACCTTTCGATTGACCTAGGCTCACATTTCCCTTCTGAAATAATTAACGTTGACAAGATCCAAGTTTACAAGGGTTTGGACATCATCGCCAACAAGATCGCAGAATCTCAACGACGAGGAATCCCCCACCACCTCCTCGGAATCATCGAAGATCCCGATTTTGACTTCACTCCTACCTATTTTTGCGACTATGTCATCTCTGCAATCGAACATATCACCAAACAAGGACACATACCCATCATCGTTGGAGGCTCCAACACCTACCTAGAATGCCCTGTGGAAGATGCCACCTTAGACTTTCGTTCCAAATATGATTGTTGCTTCCTGTGGCTTGACGTATCTCTTGATGTCCTGTTTCCCTATCTGGACAAAAGGGCTGATGAAATGGTGGACGCAGGGTTTGTGGATGAGACTAGAGAGTACTTCATGCCCGGGGCTGACTATTCGGCTGGAATCAGAAGAGCAATTGGTGCTTTTGAATTCGACGAGTATTTTAAGGTAGAGAACGATCTTAATGTTGACGATAGTTACAAGCAAGAGTTGCTCAAAGACGCTCTTCGAAGAATGAAAGAGAACACTCATACCCTGGCTCGATTGCAACTTTCAAAGATACGTCGAATCAATAATGAGCTTTCCTGGGGATTGCATCGTATTGATGCTACTAAGGTATTTGAGGCTGTTTTGAATGGCAATGTGTATCAAGTTTTGTGGAAAGATATTGCTTTTAATCCAAGCAAGGAGATTGTTCAGAATTTCCTTCAAGGCTAG 828 0.4336 MTPCKNKVVFIMGSTGTGKTNLSIDLGSHFPSEIINVDKIQVYKGLDIIANKIAESQRRGIPHHLLGIIEDPDFDFTPTYFCDYVISAIEHITKQGHIPIIVGGSNTYLECPVEDATLDFRSKYDCCFLWLDVSLDVLFPYLDKRADEMVDAGFVDETREYFMPGADYSAGIRRAIGAFEFDEYFKVENDLNVDDSYKQELLKDALRRMKENTHTLARLQLSKIRRINNELSWGLHRIDATKVFEAVLNGNVYQVLWKDIAFNPSKEIVQNFLQG 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0949 275 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 5 273 IPR039657 -
Prci1g0949 275 Pfam IPP transferase 121 225 - -
Prci1g0949 275 Pfam IPP transferase 41 114 - -
Prci1g0949 275 Gene3D - 5 273 IPR027417 -
Prci1g0949 275 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 197 IPR027417 -
Prci1g0949 275 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 135 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0949 Prci-Chr1 12128768 12129595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0949 122 274 C2H2 Transcription Factor Family AT2G27760 31.461 1.06e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0949 K10760 - gmx:121173984 348.206