Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0860 ATGCTTTGCTCAAAACAACTGCTATTTCTGCTCGTTGCTTGCTTCTTCTCAGCTATTACAGCGCTTAGTATTTCACCAGGTTCTACACTCTATGCTTCTGACACTAATCAAACATGGCCATCTCCCAGCAACGTTTTCTCTCTCCGCTTTCTTCCTTCTCAAACCCCACCTACTTCCCCTCCCTCCTTCATTGCCGCCGTCGTCTTCTCCGGCGGCACACCCGTTGTTTGGTCCGCCGGTAACGGCGTCATCGTGGACTCCCATGGCTCGCTTCAGTTTTTATCCTCTGGCGTTCTTCGCCTCGTTAACGGCTCCGGTGTCGCCGTTTGGGACTCCGGTACTTCCAATTTGGGCGTCTCCTCTGCCTCCGTGAACGACGACGGAAACTTGATTCTCTCTAATCGGACCGGTGTCGTTTGGTCAAGCTTCGACTATCCCACTGACACCATCGTGCCGTCTCAGAATTTCACAACCGGCATGTTTTTGCGATCTGGGGAGTATTCATTTACGGTTACTAGCTCAGGTAACCTCACACTTAGGTGGAATGATAGTGTACCATACTGGGATCGTGGTCTGAATTCATCTATAAATGTCAATTTAACTTCGCCAGTTTTGGAATTACAGTCGATAGGGATTTTGAGACTTTTCGATCCGAATTTGGTGACTCCTGTGGATATTGCTTATAGCAGTGATTATGCTGAAGCGAATGGCACTCTGAGAATTCTGAAGTTGGACAGTGATGGGAACTTGAGAATGTACAGTTCTTCTAGAGGCAGTGGAATTTCTACTGTTAGATGGATAGCTGTTGAAGATCAATGTAAGGTTTTTGGGTATTGTGGGAACTATGGTGTATGTAGTTACAAGGATTTAAGCCCAATTTGTGGATGCCCATCTGAGAATTTTGAGATGATTGATCCTAATGATAGTAGAAAAGGGTGTAAGGGGAAAGTGAGGCTTGAGGATTGTCCAGGCAGGGCTGCTATGTTACAATTGGACCATGCTCTAGTCTTGACTTATCCTCCTATATTCATGGTTAACCCAGAGGTATTTTTCGTTGGTATATCAGCTTGCAGGGGAAACTGTCTTGCAGCTGGTTCTTGTTTTGCTTCTACTTCATTATCAGATGGCACAGGTCTGTGTTACATAAAGACATCTAGTTTCATCAGCACCTACCACAATCCAGAACTACCCAGCACTTCATATGTCAAGGTTTGTGGACCAGTGGCACCAAACCCACCACCGAGATTGGAGGAAGCTGGGAAGGGAAAGGATTGGGAAATACATGCTTGGATAATATCGTTAGCTGTTCTGGGTACCCTTTTGGCTTTGATTGTCTTTGAGGGTGGCTTGTTGTTGTGGTGCTGCAGACGCGGTTCCAGGTTTCGCGGATTCTCTACTCAGTATGCTCTTCTTGAGTACGCTTCTGGAGCACCAGTTCAGTTCTCATACAAGGAGCTTCAGCGCTCAACAAAAGGGTTCAAAGAGAAGCTTGGTGATGGTGGATTTGGTGCTGTTTACAGAGGAATTCTTGCTAACAGAACTGTTATTGCAGTGAAACAACTTGAGGGCATTGAGCAAGGTGAGAAACAGTTCAGAATGGAGGTTGCTACTATAAGCAGCACTCATCATCTGAACTTAGTGAGGCTGATTGGGTTTTGTTCTGAAGGAAAGCATAGGCTTTTGGTGTATGAGTTCATGAAAAATGGGTCCCTTGACAATTCTCTTTTTGTCAATGAATCTCAGTCTGAGAAATTGCTGAATTGGGAGTATCGATTCAGAATTGCGCTGGGCACTGCAAGGGGAATCACTTACCTTCATGAGGAGTGCAGAAACTGCATTGTCCACTGTGATATAAAACCTGAAAACATTCTTTTAGATGAGCATTACAATGCCAGAGTCTCAGATTTTGGCCTTGCAAAACTCACAAGTGCCCCGGACCATAGGAACCGAAGCTTGACAAGTGTAAGAGGAACTAGAGGATATTTAGCTCCGGAATGGCTCGCAAATCTTCCGGCAACTTCCAAATCCGATGTCTATAGTTTTGGTATGGTTTTGTTGGAGATAGTGAGTGGAAGAAGGAATTTTGAAATCTCGGAAGGAACAAAGTGGAAAAAGTTTTCCATCTGGGCTTATGAAGAGTTCCAGAAAGGTAACATGAAAGGAATTCTGGACAAGAGACTGGTTAACCATGAAGTTGATATGGAGGGAGTGAAAAGGGCCATAATGGTGAGCTTCTGGTGCATCCAAGAACAGCCATATCAGAGGCCAATAATGAGCAAAGTGGTGCAGATGCTAGAAGGAGTCACTCAGATTGAGATGCCACCAGCTCCAAAATGTGTGACAGAAGGATCTGTTATTGCAAACCCCACTACAGCAGAAGAAGCTCCATTGTTCGCCTCATCTTCATCATCGCAAATTGTATAG 2424 0.4505 MLCSKQLLFLLVACFFSAITALSISPGSTLYASDTNQTWPSPSNVFSLRFLPSQTPPTSPPSFIAAVVFSGGTPVVWSAGNGVIVDSHGSLQFLSSGVLRLVNGSGVAVWDSGTSNLGVSSASVNDDGNLILSNRTGVVWSSFDYPTDTIVPSQNFTTGMFLRSGEYSFTVTSSGNLTLRWNDSVPYWDRGLNSSINVNLTSPVLELQSIGILRLFDPNLVTPVDIAYSSDYAEANGTLRILKLDSDGNLRMYSSSRGSGISTVRWIAVEDQCKVFGYCGNYGVCSYKDLSPICGCPSENFEMIDPNDSRKGCKGKVRLEDCPGRAAMLQLDHALVLTYPPIFMVNPEVFFVGISACRGNCLAAGSCFASTSLSDGTGLCYIKTSSFISTYHNPELPSTSYVKVCGPVAPNPPPRLEEAGKGKDWEIHAWIISLAVLGTLLALIVFEGGLLLWCCRRGSRFRGFSTQYALLEYASGAPVQFSYKELQRSTKGFKEKLGDGGFGAVYRGILANRTVIAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGKHRLLVYEFMKNGSLDNSLFVNESQSEKLLNWEYRFRIALGTARGITYLHEECRNCIVHCDIKPENILLDEHYNARVSDFGLAKLTSAPDHRNRSLTSVRGTRGYLAPEWLANLPATSKSDVYSFGMVLLEIVSGRRNFEISEGTKWKKFSIWAYEEFQKGNMKGILDKRLVNHEVDMEGVKRAIMVSFWCIQEQPYQRPIMSKVVQMLEGVTQIEMPPAPKCVTEGSVIANPTTAEEAPLFASSSSSQIV 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0860 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 191 IPR036426 -
Prci1g0860 807 PANTHER OS07G0415500 PROTEIN 4 777 - -
Prci1g0860 807 ProSiteProfiles Bulb-type lectin domain profile. 15 145 IPR001480 -
Prci1g0860 807 ProSiteProfiles Protein kinase domain profile. 491 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0860 807 Gene3D Transferase(Phosphotransferase) domain 1 566 775 - -
Prci1g0860 807 SUPERFAMILY Protein kinase-like (PK-like) 473 766 IPR011009 -
Prci1g0860 807 PIRSF SRK 1 805 IPR024171 GO:0004674
Prci1g0860 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 145 - -
Prci1g0860 807 Gene3D Phosphorylase Kinase; domain 1 461 565 - -
Prci1g0860 807 SMART serkin_6 491 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0860 807 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Prci1g0860 807 Pfam S-locus glycoprotein domain 233 297 IPR000858 GO:0048544
Prci1g0860 807 ProSiteProfiles Bulb-type lectin domain profile. 147 265 IPR001480 -
Prci1g0860 807 Gene3D - 18 143 IPR036426 -
Prci1g0860 807 Pfam D-mannose binding lectin 76 157 IPR001480 -
Prci1g0860 807 Pfam Protein kinase domain 494 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0860 807 SMART blect_4 30 146 IPR001480 -
Prci1g0860 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 146 268 - -
Prci1g0860 807 Gene3D - 144 266 IPR036426 -
Prci1g0860 807 CDD STKc_IRAK 497 767 - -
Prci1g0860 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Prci1g0860 807 FunFam S-receptor-like serine/threonine-protein kinase 464 565 - -
Prci1g0860 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 566 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0860 Prci-Chr1 9971056 9974041 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0860 434 775 Receptor kinase-like Gene Family AT5G20050 39.155 2.20e-78 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci1g0860 Pkinase 4.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0860 - - qsa:O6P43_004111 1169.45